Osmerus eperlanus (European smelt): 134023394
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Entry
134023394 CDS
T10927
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134023394 (lingo4b)
Membrane trafficking [BR:
oep04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134023394 (lingo4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_LRWD1
Ig_2
LRR_6
LRR_9
V-set
LRRNT
C2-set_2
LRR_Zer-1
Ig_VEGFR-1-like_5th
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
134023394
NCBI-ProteinID:
XP_062321464
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Position
7:complement(18191972..18202338)
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AA seq
603 aa
AA seq
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MFVESVVRWGAWSILLQCGLGVSAGFCPPRCVCRPDTMEVNCSGKHLTSVPESLPSDMKR
LDLSQNKLKTLGRRQFLGLTQLQEMDLSDNVISMIEVEAFQGLQNLRILRIKNNRLKIIP
VGVFSGLFSLQFLDLSENEILVFLDYTFRDMGNLQLLEAGENDLVFISQRAFTGLQNLQE
LNLDRSNLTSIPTEALSQLQSLTRLRLLRLTISSLPNNVFRRLHRLRSLLISHWPSLDTL
ASNSLIGLNLTSLVISSSNLSAVPYSALRHLVYLRYLDLSYNPITSIQGNLLGDLLRLQE
LHLVGGNLLRIEPGAFRGLAYFRVLNVSSNQLTTLEEGAFHSVGNLQVLRLDGNPLACDC
RLLWVVRRRFRLNFDGRQPTCLSPHMVREREFQGFSEKELPRVFICRPSRIIDRRRQEAN
VEEGTNILFSCKADGDPAPTITWISSQKTLLSPTGRIRVLSDGTLEVRYAQVQDSGMYQC
TAGNAAGNDTLSVSLQVKGFPRNRTMPFFTEQGWIESSFPPTANSSAQVANPYPFDAKTL
IIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRASMGGGGEGGDTGRFTM
KLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtctgtcgttcgatggggagcatggagcatcctgctccagtgtggattg
ggtgtgtcagctgggttttgtccacctcggtgtgtgtgtcggcctgacactatggaagtg
aactgctcaggcaaacacctaacctcagtgcctgaaagcttacccagtgatatgaagcga
ttggacctatcccagaataagctaaagacactgggtcgtcgccagttcttggggctcacc
cagcttcaggagatggacctgagtgacaatgtcatctcaatgattgaagttgaggctttc
cagggcttgcaaaacctcaggattcttcgtattaagaataatcgtttaaagattattcct
gttggggtcttttcgggcctattcagtttgcagttcctggacctcagtgaaaatgagatc
ctggtctttcttgactacaccttccgagatatggggaacctgcagttgttggaggctggg
gagaatgacctggtgttcatctcccagcgggcgttcactggcctgcagaacttgcaggag
cttaacctggaccgcagcaacctaacctccatccccacagaagcgctgtcccagctccag
agcctgacacgcctccgcttactacgcctcaccatctcatcgcttcccaacaatgtcttc
cgcagattgcaccgcctgcgtagcctgctgatctcccactggccctccttggacacgttg
gccagcaacagtctcatcggcctcaatctgacctctttggtcatcagcagcagtaacctc
agcgctgttccttactctgccctgcgccaccttgtatacctgcgctatctagacctgtcc
tacaaccccattaccagcatccagggaaatctgctaggggacttgttaagactgcaagaa
ctgcacctggttgggggaaacctgctgaggatcgagcctggggccttcagaggactcgct
tacttccgggtgctcaatgtttcctccaatcagctcaccaccctggaggaaggcgccttt
cactccgtagggaacctccaggttctccgactagatggaaacccactggcatgcgactgc
cgtctgctctgggtcgtccgaaggcggttccgcctgaattttgatggacggcagcccact
tgtttgtctcctcatatggtacgagagagggagttccaggggttctcggagaaggaactc
ccaagagtgttcatctgccggccaagccgcatcatagaccgcagaagacaagaagccaac
gtagaggagggcaccaacatactgttctcctgtaaggctgatggtgatccagcacccaca
atcacatggatttcatcccagaagacccttctctctcccacgggccggatcagggtgttg
tctgatgggactctggaggtacgctatgcccaggttcaggacagtggcatgtaccagtgc
acagcaggcaatgcagctggcaacgacaccctgtctgtcagcctgcaggtgaaggggttc
ccacgaaatcgcacaatgcccttttttaccgaacagggctggatcgagtcttccttccca
cccaccgctaattcctctgcccaggtggctaacccatacccatttgatgccaagacattg
atcatagccaccactatgggcttcctttccttcctcagctctgtggccatctgctttgtc
ttcatgttcttctggagccagagcaaagggcagatcaaacacacggccacgatcgacttt
gtgcctcgcgcctccatggggggaggaggggaaggaggggacactggtaggttcaccatg
aagcttatctaa
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