Osmerus eperlanus (European smelt): 134023456
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Entry
134023456 CDS
T10927
Symbol
tlr21
Name
(RefSeq) toll-like receptor 21
KO
K18808
toll-like receptor 13
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oep04054
]
134023456 (tlr21)
Pattern recognition receptors [BR:
oep04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
134023456 (tlr21)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
134023456
NCBI-ProteinID:
XP_062321580
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Position
7:19874522..19877837
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AA seq
986 aa
AA seq
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MKRSTSQMIALVGVVLSLVQFTLSYSYRNCIEDPNSSYQNFSCTRRGARNIFKDIVVDLP
PSATTLTISFNKFKDIPDNTFAHLPDLTTLRINFNHQLRTIGKQAFHNLDHLKSLNLSCN
NLSLLNSLVFKNLSSLTFLSLSNNTLKGLQKNLFSPVTNLDTLILRQNLLSNFSEVAESV
TPLQKLKKLDLCCNKLTSIRHSTVTSLPKSLTALYLCRNQLYTLSCAKTFLGNINLLDLS
YNEHLPSTAFKNVDLRHINYLRLRSTNVTILYLFKVSNVRATQIDFSGMGLSNNSQLEEF
CKLLRSKVKHVKKMMLGNNGIRTLWENTLSSCPPITVTLDLSRNFLRNISCLQFLKGQDQ
IQSFSVEHNHLTTLVSCIQMLPSLKNMTEISYRYNRILKVDDFAFDQTPNIKTLELNINT
IAYLGRKALKGLKNLKTLRLDNNLLTDLFNDTFEDLLSLQTLNLRNNRIAVIFYRTFFSL
TNLTTLDLGGNKISHFEKSALEGLKSLKKLYLDGNHLNQIDSTQFRVFQDTLQVLDLQRN
QIRYLSEYVRSPFVNLTKLRDLKLDSQMPYGINLLPHAFFRGLSSLTSLYLTNNHITNFA
TDAFDDLTGLNFLTLDNSCAGVVQLQPGVFKNLRNLRKLIAENMGIQNFSKEVFGNLTSL
QILQLNHNVMQTLDVEVLEALPKLRYLDIRNIPFSCTCPNNNLQNWTVHNKQVQLVYLYN
LTCPGETNIHFVNFDTKVCFIDLGQYLFISTYIVIILTMLIPVLYTKLYWKMKYSYYVFR
SWFSESWRRLREEEEVYEYDAFISYNSADESWVLEHLLPNLEGNGSNFKLCLHHRDFELG
RYIVDNIVSAVYGSRKTICVVSKDFLRSEWCSLEIQLASYRLFHDLRDVLLLVFLEPIPE
RQLSAYHRMRKVMLKKTYLQWPEPDCSDPVQAQELFWNQLRRALSTGSSRVEELGEKGRE
DKDATKHSENYEENETMDDKRHHLLA
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttctacaagccagatgattgcattagtgggagttgtactttcccttgtgcag
tttacactgtcttatagttacagaaattgcattgaggacccaaactcatcctatcaaaac
ttcagttgcacccgacgcggggcgaggaacatctttaaggacattgtagttgaccttccc
ccctctgccaccacactaacaatctccttcaacaaatttaaagacatacctgacaacacc
tttgctcaccttcctgacctcacaaccctcaggataaacttcaaccaccaattaaggacc
attggcaagcaggcctttcataacctggatcatcttaaaagccttaacctatcctgtaac
aatctgtcactgctcaacagtttagtgtttaaaaatctttctagtcttactttcctctct
ctgtccaataacacactaaaggggcttcaaaaaaacctattctctccagtgaccaatttg
gacacactaatattacggcaaaacctcttgtctaatttctcagaagtggctgaatctgtg
actcccctgcagaaattaaagaaacttgacctgtgctgtaataaactaacgtctataagg
cattctacagtcacgagtttacccaagagcctcacagccctatatctctgtagaaaccaa
ctatacacattatcttgtgcaaagacattccttggaaacatcaacctgttggatctttcc
tataatgaacatctcccttctacggctttcaaaaatgtcgatctgaggcatattaattat
ctgcgtttacgttcaactaatgtcacaattctttacctgtttaaagtcagtaatgtcaga
gcaactcaaatagacttttctggtatgggattgagcaacaattcacagctggaggaattc
tgtaagctgttaagaagtaaggtcaaacatgtcaaaaagatgatgcttggaaacaatggg
atcaggactttgtgggaaaacacattgtccagctgtccaccaattaccgttaccttagac
ctttcccgtaacttcctaaggaatataagctgtcttcaatttcttaaaggacaggatcaa
atacagagcttcagtgttgaacataaccatctcactaccctagtgtcgtgcatacaaatg
ctcccttctttaaaaaatatgacagaaataagctatcgatacaatcgcatactgaaggta
gatgactttgcttttgaccaaaccccaaatatcaagactttagagctcaacataaacaca
attgcctatcttggccgtaaggctctaaaggggctgaaaaaccttaaaacacttcgtttg
gacaacaacctcttaacagatctgtttaatgacacatttgaagatctgcttagcctacaa
actctgaatcttcgtaacaaccgcatagctgttattttttacagaaccttcttttccctg
acaaacctcacaaccttagatcttggggggaacaaaatcagtcactttgagaagtcggcc
ctagaaggactcaaaagtctcaaaaaactctacctggatggcaatcatttaaatcagata
gacagcactcaattcagagtgtttcaagacacacttcaagtgctcgacctacaaaggaat
cagattagatacctctctgaatatgttcgttctccatttgtgaacttaaccaagctccgg
gatctgaaactggatagccagatgccctatggaatcaacctgttacctcatgctttcttt
cgtggcctgagctccctgacgtccctctaccttactaataatcatatcaccaactttgca
acagatgctttcgatgatctgacaggcttaaatttcctcacgttggacaactcttgtgca
ggggtggtgcagctgcaaccaggcgtcttcaaaaacctgcgaaacttgcgcaagctgata
gctgagaatatgggcatccagaacttttccaaagaggtttttgggaatttgacatctttg
cagatcttgcagctcaaccataacgtgatgcagaccttagacgtggaagtactggaggcc
ctcccaaagctgcgatacctggacatacgtaacatccctttcagctgtacctgccccaac
aataacctgcagaactggaccgtacacaataagcaagttcagctagtttacctctacaat
ctgacctgcccaggagaaacaaatatccactttgtcaactttgacaccaaggtttgcttc
attgacctcgggcagtatctcttcatcagcacgtacattgtgattattctaacaatgctc
atccctgtcctgtacaccaagctgtattggaaaatgaagtacagctactatgtgttcagg
tcctggtttagcgaaagctggcgccgactaagggaggaagaggaagtgtatgaatatgat
gcatttatctcttataactctgccgatgagtcatgggtgctggaacatctgctgccgaat
ttggaggggaacgggtccaattttaaactgtgtctgcatcaccgtgactttgagctgggt
cgttatatcgtcgacaacattgtctctgctgtgtacggcagtcgcaagactatctgtgtg
gtcagcaaggacttccttcgcagtgagtggtgctcactagagatccagctggctagctac
aggctattccatgaccttcgagatgtcctcctcctggtattcctcgagcccatccctgaa
agacagctgtctgcctaccaccgcatgagaaaggtcatgctgaagaaaacctaccttcag
tggcctgagccagactgcagcgacccggtgcaggcccaggagctgttctggaaccagctg
aggagagccctcagtactgggagtagcagggttgaggaactgggggagaaggggagagag
gataaggatgccacgaaacacagtgagaattatgaagaaaatgaaaccatggatgataaa
agacatcacttgctggcttga
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