Osmerus eperlanus (European smelt): 134023468
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Entry
134023468 CDS
T10927
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134023468
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
134023468
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GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
UBA_N4BP1_C
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
134023468
NCBI-ProteinID:
XP_062321606
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Position
7:19269064..19276252
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AA seq
627 aa
AA seq
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MDKACPSQDQDSDNFQLHVDFFRKLGYSATEVRCAIQNLGLNFDTNAVLEKLVQARKAPV
SNAEMKDMAALHTAPIAGLESPQRAQRDTPQVSLDDRRDGDGELNPIVIDGSNVAMSHGN
KEVFSCRGIELAVNYFLDRGHTAITVFVPSWRMEQPRPDAPITDQHILTELEREKIVVFT
PSRRVGGKRVVCYDDRFIIKLAHDTDGVIVSNDTYRDLQGERPEWKKCIEERLLMYSFVN
DKFMPPDDPLGRHGPSLDNFLRKNPLPSEQKRQLCPYDKKCTYGIKCKFYHPERTQQSYR
SLADELRDNARLSTVKEDRNTKVSQRWPQTDLGSSRSSYRHTLEHDLEHRLVLDRHSPLQ
KGHVNENQLLYWDRPLNSGHQFTRDSGGFSQHDWPAMPRPLYNSDQPYVSISHKHLDSGL
GSYESQYSDAPHVLSKPLRSRPQQGLPPSPWPRLPAMHLDRQDIEQPCRCCSHITSSAGP
QKHCSYPSLEPHSQPRYNTYPTPQFPPSIHHYSLPSHFQDRGPPQQKYWSDPFQGMPQTR
TSCSLPSPLSSPACHGHSCPYQDQPSWGCPMPQPSAFDPDREELRKKLQAIFNPHHVDMV
MGMFPHLRDSQKLAAEILTLRYQGGAF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggcctgccctagccaggaccaagactcagataatttccaacttcatgtggac
tttttcaggaagctgggttactccgccactgaagtgaggtgtgccatacagaatctgggc
ctaaactttgacaccaacgcagtacttgagaagttagtccaggctaggaaagcgcctgtg
tccaatgcagagatgaaagatatggcagcattacacacagcccccatagctggtctagag
agcccacagagagcccaaagagacactccacaagtctcactggatgataggagggatgga
gatggagagctaaatcctatcgtcattgacggcagtaatgtggccatgagtcatggaaac
aaggaggtattttcatgcaggggcatcgagctagcagtcaactacttcctggacagaggt
catacggccatcactgtttttgttccttcttggcgtatggaacaacctagaccagatgct
cccatcacagaccaacacatcctgacggagctggagagagagaagatagtggtcttcacc
ccttcgcgacgtgtcggaggcaaacgggtggtctgctacgatgaccgcttcatcatcaag
ctagcccacgataccgatggcgtaatagtgtccaatgacacgtaccgcgatctgcagggc
gagaggccggagtggaagaaatgcatagaggagaggctccttatgtactcttttgtcaat
gacaagttcatgcctcctgatgatcctctaggccgccatggccccagtctggataatttc
cttaggaagaacccactaccatcagagcagaagagacagctctgtccctatgataaaaag
tgcacttatgggataaagtgtaagttctaccaccctgaacgtactcaacagtcttaccgc
tcactggctgacgagctgcgggacaacgcccgtctctccacggtgaaagaggacaggaac
accaaagtgtcgcaaaggtggcctcaaactgatctaggatcatctagaagctcctatcga
cacacattggagcatgacctggagcacaggctggttttagataggcacagccccctccaa
aagggccatgtgaatgagaatcagcttctgtactgggataggcccttaaatagtggtcac
cagttcaccagagattcaggaggcttctctcagcatgactggcctgcgatgcctcgtccc
ctctacaacagtgaccagccctacgtcagcatttcccacaagcacctggactctgggctg
ggctcatatgagagccagtattccgatgccccccatgtcctcagtaagccacttaggagc
aggcctcagcagggtttacccccaagcccgtggccgagactccctgccatgcatctagat
aggcaggacatcgaacagccttgtcggtgctgctcccacataacatcatccgcaggcccc
cagaagcattgcagttacccaagcctggagccccactcccagcctagatacaacacctac
ccaaccccacagttccctcctagcatccaccactacagcctgcccagccacttccaggac
aggggtccgccacagcaaaagtactggtctgaccccttccaggggatgccccagacaagg
acatcctgcagcctcccaagccctctgtcctctccggcctgtcatggccactcatgcccc
taccaggaccagccctcatggggttgccccatgccccagccttctgcttttgacccagac
agggaggagctccgcaagaaactgcaggccatcttcaacccccatcatgtggatatggtt
atggggatgtttcctcacctgagggactcccagaagctggcggcagagatcctcaccctc
aggtatcagggaggagccttctga
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