Osmerus eperlanus (European smelt): 134023574
Help
Entry
134023574 CDS
T10927
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134023574 (smarcc2)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134023574 (smarcc2)
PBAF complex
134023574 (smarcc2)
GBAF(ncBAF) complex
134023574 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134023574
NCBI-ProteinID:
XP_062321768
LinkDB
All DBs
Position
1:complement(17939972..17949605)
Genome browser
AA seq
1089 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNPPLTKLPMKSFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQMLLHWGYSPDSYDTWISASEVEAAVEDPPTPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGGPKRKRISAKTLTDEVTTPDERRDKKSGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPAAPYTKSKRGQREEEQEDLTKDLDEPSPVPAVEEVNLPKTA
NTKKDSESTPVKGGTMTDLDEQEDESMETAGKEEEEGSPSVKGEPVKGSDLHEDNVTEQT
HHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYL
TSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSL
VPLQPKASQVHTHTHTHTHTDKHTTHTGEAHADPGLPPHPQTPAAQQILSFPDKVKDKPA
DLQNFGLRTDMYNKKTGPAKSKSAASSMREWTEQETLLLLEGLEMYKDDWNKVSEHVGSR
TQDECILHFLRLPIEDPYLEDSSSSLGPLAYQPVPFSQAGNPVMSTVAFLASVVDPRVAS
AAAKSALEEFSRMKEEVPAALVEAHVRRVEEAARASGRQDPLYGLEGSGIAGTSLEEGDK
PEESSEEIKSDGQSSEEKREAKDGKDGAQEEEEKQGENGKKEEEKGRETEGERDSEKTDP
EMGDGEKEKEGKEGSEDGQREAESEGERKAKVERDVGEGNLSTAAASALAAAAVKAKHLA
AVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHME
QLKYAEMRARQQHFQQIQHQQHNQTGGPHPAQASAAPAPQSLTPNQPASGTSAPQKAPSP
APPSSMGGPSSTQPVEPQPPPGPHISPPGHSAQTPAAHPSTNPTPALHEPSTPLTGETLH
SSTPVPPMQ
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtttcacagttcgacaatgtccgcgtgtggttgggcaagaactataaaaagtacatccag
gcagagccccccaccaacaagtccctctccagcctggtggtccagctgctgcagtttcag
gaggaggtgtttgggaagcacgtcagcaacccacctcttaccaagctgccgatgaagagc
tttctggacttcaagtctggcggggccctttgccacatcctggctgcagcctacaagttc
aagagcgaccagggctggcgcaggtttgacttccagaatccctctcggatggaccgtaac
gtagagatgtttatgaccatcgagaagtccctggtccagaacaactgtctgagtcgaccg
gtcatctatctgagctcagacattgagcccaagctgttgggaaagctgaaggatatcatc
aagcggcaccagggctcagtgactgaggacaaggcttccagttctcatgtggtggtgcct
atccctaccagcctggaagaggaggagtgggttcgccctgtaatgaagagagacaagcag
atgcttctacattggggctactctcctgacagctatgacacgtggatctcagccagtgag
gtagaggcggctgtagaggacccacctaccccagagaagcccaggaaggtgcatgctaag
tggatcctagaccttgaccagtacaacgagtggatgaatgaggaggactacgaggtgggg
gagggagggcccaagaggaagaggatctcagccaagaccctgacggatgaggtaaccacc
ccggacgagaggcgagacaagaagtctggcagcgccaagaagaggaagcgctcgccctcc
ccctcgcccacccccccgccccaggagagcaagaagaagaacaccaagaaagggccagca
gccccgtacaccaagtctaaacgtggccagagggaggaggagcaggaggacctgaccaag
gacctggatgaaccctcacctgtaccagctgtggaggaagtcaacctacccaagacggcc
aacactaagaaagactctgaatcaactccagtgaagggaggcaccatgacagacctggac
gaacaggaggatgagtctatggaaacagcaggaaaggaggaggaggagggctcccccagt
gtgaagggggagccagtgaaaggatctgacctccatgaggacaacgtgacagagcagact
catcacattatcatccccagttacgccgcctggtttgactacaacagtgttcatgctatt
gagcgcagagcccttccagagttctttaatggcaagaacaagtccaaaacccctgagatt
tacttggcctacaggaacttcatgattgacacctacaggctgaaccctcaggagtacctc
acctccactgcatgtcgcaggaacctggcaggagacgtgtgtgccatcatgagggtccat
gccttcctggagcagtgggggctgataaactaccaggtggactcagagagccgccccacc
cccatgggccccccaccaacctcccacttccacgtcctggcagacaccccctccagccta
gtgcccctgcagcccaaggcctcccaggtacacacacacacacacacacacacacacaca
gacaaacacacaacacatactggtgaagcacatgctgacccaggcctgcctccccatccc
cagaccccggctgcccagcagattctgtccttcccagacaaagtgaaggataagccagct
gacctgcagaactttggcctcaggacagacatgtacaacaagaaaactggtcctgcgaag
agcaagagtgcagccagctccatgagagagtggactgagcaggagactctgctactgctg
gaaggactggaaatgtacaaggatgactggaacaaggtgtcggagcacgtgggctcacgt
acacaggatgagtgtatcctccacttcctgcggctgcccatcgaggacccctacctggag
gacagctcctcgtctctaggccctctggcctaccagcctgtgcccttcagccaggcaggc
aaccccgtcatgagcacggtggccttcctggcatcagtggtcgatccacgtgtggcctca
gctgctgccaagtcagctttggaggagttctctcgtatgaaggaggaggttcctgcagcg
ctggtggaggcccatgtgcgcagggtggaggaggcggcgagggccagcggcagacaggac
cccctctacggcctggagggcagcggtatcgctgggaccagcctggaggagggagacaaa
cccgaagaaagcagcgaggagatcaagagtgacggccagtcaagcgaggagaaaagggaa
gccaaggacggcaaggatggagcacaggaagaggaggagaagcagggagagaacggaaag
aaggaggaggaaaaaggcagagagacagaaggagagcgagacagtgagaaaacagaccca
gagatgggcgatggagagaaggagaaggaagggaaggagggctcagaggatggccagagg
gaagcagagagcgagggagaaaggaaggcgaaggttgagcgcgacgtgggagaggggaac
ctgtctacggctgctgcctcagcgctggctgctgctgctgtcaaagctaagcacctggca
gcggtagaggagaggaagatcaagtccctggtggctctgctggtggagacccagatgaag
aagctggagatcaagctgaggcactttgaggagctggagaccatcatggaccgtgagagg
gaggctttggagtaccagaggcagcagctgctggctgaccgtcagtcctttcacatggag
cagctgaagtatgccgagatgcgggcacgccagcagcatttccagcagatccagcaccag
cagcacaaccagaccgggggtccccaccctgcccaggcctccgctgcccccgcaccacag
agcctgacgcccaaccagccggcctccggcacctctgcaccccagaaggctccgagccct
gcacccccttcctccatgggcggaccctcctccactcagcccgtcgagccccagccgccc
cctggacctcacatctctccccctggtcactcagcccaaacccctgcagcacaccccagt
accaaccccactccggcactccatgagcctagcacccctctaactggtgagacactccac
tcctcaacccctgttcccccgatgcagtga
DBGET
integrated database retrieval system
