Osmerus eperlanus (European smelt): 134023674
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Entry
134023674 CDS
T10927
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134023674 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134023674 (prpf3)
Spliceosome [BR:
oep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
134023674 (prpf3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
134023674
NCBI-ProteinID:
XP_062321946
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Position
7:complement(21538603..21545979)
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AA seq
712 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDESAG
GFVERLFEALEESRIARGNKGAGERNRKRDLKDVFGDEVEVTVGREVAEVVEGAPVKRKR
VPRFEEVEEPEVIPGPPAESPGMLTKMQIKQMMEAATKQIEERKKQLSFSGPVPNSPRLP
LPSPQTDLPASRLLSAPSAPSSGASQSIPPSQAATFMNDAIEKARKAAELQARIQSQLVM
KPGILGALGSTGPHNLVALANLHAMGIAPPKVEVKEVNKPTPLILDELGRTVDASGKEVE
LTHRMPTLKANIRAVKREQFRQQLKEKPGDDLESTSYFDQRVTLTPAQRPRKGFKFHEQG
RFEKIAQRIRTKAQLEKLQTEIAQAAKKTGIQASTKLALIAPKKELGDGEVPSIEWWDSY
ILPSNIDLLSLRSKEISFVNMELFGVTNLVEHPAQISPPVDTDKPVTLGVYLTKKEQKKL
RRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQ
KAHEEANAARKLTAEQRKEKKVKKLKEDLTHGVHIAVFRIRNLHNPAKKFKVEANANQLY
LTGTVVLHRDVNIVVVEGGPKAQKKFKRLMLHRIKWPEHNSKRDDPDADDDTKRNNRCSL
VWEGTAKERSFGEVKFKQCPTENMAREHFKKHGTEHYWDQALSQSVLESTDD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcccaagcgggaggtggaggagctccggccatgggtggagcggaccgtgaag
aaggtgttgggtttctcggagcccaccgtggtcactgcggcgctgcactgcgtaggaaag
ggcctggataagaggaaaaccacagatcagctgaggccattcctggacgagtcggcgggt
ggttttgtggagaggctgttcgaagcgttggaggagagccgcatcgctcgtggcaacaag
ggagcgggagaaaggaaccggaaaagagacctaaaggatgtgtttggggacgaggtggag
gtgacggttggtcgagaggtggctgaggtggtggagggagcgcccgtcaagaggaaacgc
gttcctcgttttgaggaggtggaggagccagaggtcatacctggaccccctgcagagagc
ccgggcatgctcaccaagatgcagatcaaacagatgatggaggcagctaccaaacagata
gaggagaggaaaaagcagctcagcttctctggtcccgtcccaaactcaccgagactgccc
ttgccctcgccccagacagacctcccagcctcgcgcctgctctccgctccctccgcccct
tcctctggtgcctcccagtccatccccccctcccaggcggccacgttcatgaacgacgcc
atcgagaaggcgcgcaaggctgcggagctgcaggcccggatccaatcccagctggtgatg
aagccgggcatcctgggagccctgggcagcacgggacctcataacctggtggcgctcgcc
aacctgcacgccatgggcatcgctcctccgaaggtggaggttaaggaggtgaacaagccc
accccgctcatcctggacgagctgggccgaacggtggacgccagcggcaaggaggtggag
ctcacacaccgcatgccgactcttaaagccaacatccgagcggtaaaaagggagcagttc
cgtcagcagctgaaggagaagccgggagacgacctggagtccacctcctactttgaccag
agggtcacactgaccccagcccagcgaccccgcaagggcttcaagttccacgagcagggt
cgctttgagaagatcgcccagaggatccgaaccaaggctcagttggagaaactgcagaca
gagatcgctcaggctgctaagaagactggcatccaggcgtccaccaagctggctctcatc
gcccccaagaaggagcttggcgatggggaggtgcccagcatcgagtggtgggactcctac
atccttccctccaacatagacttgttatctctcagatccaaagagatatcgtttgtcaac
atggagttgttcggggtcaccaacctggtggagcaccctgctcagatcagccccccagtg
gacacagacaagccggtgaccctgggagtttacctgaccaagaaggagcagaagaagttg
aggagacagacccgcagggaggcccagaaggagctgcaggagaaggtccgcctgggcctc
atgccccctccagagcccaaagtgcgtatctccaacctgatgagagtgttgggaaccgag
gcagtgcaggaccccacgaaggtggaggcccacgtcagagcacagatggccaagagacag
aaggctcacgaggaggcgaatgcggctcgtaagctcacagcagagcagaggaaggagaag
aaggtcaagaagctcaaggaggatctcactcacggggttcacatcgctgtgttcaggatt
cgtaacctccacaaccccgctaagaagttcaaggtggaggccaacgccaaccagctgtac
ctgacgggcaccgtggtgctgcaccgggacgtcaacatcgtggtggtggagggaggtccc
aaagcccagaagaagtttaaaagactgatgcttcacagaatcaagtggccggaacacaac
tctaagagagatgacccagatgctgacgacgacacgaagaggaacaacagatgctctctg
gtctgggagggcacagctaaggagcggagttttggagaagtgaagttcaagcagtgtccc
acagagaacatggccagagaacactttaagaaacacggaaccgagcactactgggaccag
gccctcagccagagtgtgttggagagcacagacgactga
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