Osmerus eperlanus (European smelt): 134023677
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Entry
134023677 CDS
T10927
Symbol
itga10
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-10
KO
K06586
integrin alpha 10
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
oep04810
Regulation of actin cytoskeleton
oep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134023677 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134023677 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134023677 (itga10)
04810 Regulation of actin cytoskeleton
134023677 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134023677 (itga10)
Cell adhesion molecules [BR:
oep04515
]
Integrins
Integrin alpha subunits
134023677 (itga10)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
FG-GAP_2
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
134023677
NCBI-ProteinID:
XP_062321955
LinkDB
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Position
7:21591685..21625276
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AA seq
1173 aa
AA seq
DB search
MELRKYLVFFKLVVLLKGLCECFNIDVKHPRIFTGPEEALFGFSVLQHSSHDGEKSMLVG
APWDGSPNNRRGDIYKCVVGEERNSNCTKVNLGERALQNVSRNLKNSHLGMTLSPDNPDG
FLACAPLWSQECGTSVFSTGICASVSDDLEPRETIAPTAQRCSTYMDIVIVLDGSNSIYP
WYEVQNFLSNILSKFHISPEQMQVGVLQYGEVAVHEWSLRDYQTTQEVVEAAKNISRQEG
RETRTAYAIHMGCTEAFSPERGAREGATKVMIVVTDGESHDGEELEDALSECEERNITRY
AIAVLGHYIRRQQDPETFISEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFTLEGT
LGYNQSAFTMEMSQIGFSTHTLDDGILFGMVGAYDWDGGVLKESAAGSIMPPREAFESEF
PLELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFELSDSGDVDITQALNGE
QIGSYFGSEVCGVDVDQDGITDVLLVAAPMFLGVRSREAGRVYMYTLNAGEEFVPNGTLQ
AEVRVQDARFGYALAAAHDLNQDGFTDLLVGAPLEDDHTGAIYVYHGQGIYITPTYTQRI
AGLSLSPSLRYFGRSLSARLDLDGDELLDLSVGAQGSAVLLSSRSIVQVNVSLSFQPHSI
NVIQKTCQRGGRDSACLNAIACFLALSRTPGTHSNSFELWVSAMLDDRKLSARALFDDSS
QRQTQLGVIVHTGRSVCYTLPFHVYDTADYIRPISFSLRFKINNTESGPVLDEGWPTTVK
KSIPFFKDCGEDDVCVTDLVLKAHMDISGTRQMPYVIRSPRRRLSVEVQLQNRLENAYNT
SLTLQYSRNLLFSSLSIREDSQFKIECTALSSNSHSCNVSYPVFRSQSKVNFMLEFEFSC
TSLLSKVQMKLLVASDSVEREATLGDNNVQLQTIVQYEPDLFISSDSNLNRYEVHPTRTI
SEAIGPEFQTHFRLQNLGCYSVRDLELRLSLPSVAAGDRVFMTVTDVFSYNSSGVNCSVE
GDLARLKARQRDVRLLHPEHMQQNDMLNCSRSRCIEVVCQVQQLLRGQTALIRISRRVHD
HFFRQAKFKAVKIVSAYRLAAKESNLVTLGSSALWRETVLEVLKGRAIPISLWILIGSII
GGLLLLALIIFILWKLGFFTRKQRGDEDEKHED
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaggaaatatctggtgtttttcaagttggttgtccttttaaaagggttgtgt
gaatgcttcaacattgacgtgaagcaccctcggatcttcaccggcccagaggaagctctg
tttgggttctctgttctccaacacagctcacacgatggagaaaaatcaatgctggttggt
gctccctgggatggatcgccgaataacaggagaggagacatatacaagtgtgtcgtggga
gaggaaaggaactccaactgcaccaaagtgaacctgggggagagggctctgcagaacgtg
tccaggaacctgaagaactcccaccttgggatgaccctcagcccagacaaccccgacggc
ttcctggcgtgcgcccccttgtggtctcaggaatgcggcacgtctgtcttcagcaccggg
atctgcgcctccgtcagcgacgacctggaacccagggagaccatcgcccctacagcgcag
agatgctccacatacatggacatcgtgatagtcctggacggctccaacagcatctacccc
tggtatgaggtccagaactttctcagcaacatcctcagcaagtttcacatcagcccagag
cagatgcaggttggggtgctgcagtacggtgaggtagcggtccatgagtggtcgctgaga
gactaccagaccacacaggaagtggtggaggctgccaagaacatcagcaggcaggagggg
cgggagacacgcacggcgtacgccatccacatgggctgcacggaggcgttcagcccggag
agaggggccagggagggtgccaccaaggtgatgatcgtggtgacggatggagagtcacac
gacggggaggagctggaagatgctctgtctgagtgtgaggagaggaacatcactagatac
gccatcgctgtgctaggtcattacatccgcagacagcaggatccagagaccttcatcagt
gagatcaagtacatcgccagcgacccggacgagaagtacttcttcaacgtgacggacgag
gcggcgctcaacgacatcgtggacgccctgggagaccgcatcttcactctggaggggacc
ctgggctacaaccagagtgccttcaccatggagatgtctcagatcggcttctccacacac
actctggacgacgggatcctgtttgggatggtgggagcgtacgactgggacgggggggtg
ctgaaggagagtgcggccgggagcatcatgccccccagagaggccttcgagtccgagttc
cccctggagctcaaaaaccacgctgcctacctcggctacacggtctcctcggtgatagtg
ggggactggaggaggctgtatgtggcaggagcgcccaggttcaaacacaaagggaaggtc
atcctgtttgagctcagtgacagcggggatgtggacatcacgcaggcgctgaacggagag
cagatagggtcctattttggcagtgaggtgtgtggggtggacgtggaccaggatggtatc
acagatgtgctgctggtggcagcgcccatgttcctgggagtgaggagcagagaggccggc
agagtctacatgtacactctgaacgcaggggaggagtttgttcctaacggcactctccag
gcagaggtcagagtccaggacgccaggtttggctacgccctggccgccgcccacgacctc
aaccaggacggcttcaccgacctgctggtgggcgcacctctggaggacgaccacacgggg
gcgatatacgtgtaccacgggcagggcatctacatcacccccacctacacacagcgtatt
gctggcttgtccctgtctccctctctgcgttatttcggccgcagcctgagtgcccgtctg
gaccttgatggagatgagctgctggacctgtctgtgggggcgcagggcagcgccgtgctg
ctcagctcccgcagcatcgtgcaggtgaacgtgagcctgtccttccagccacactccatc
aacgtgatccagaagacctgtcagcgcggcggccgggactccgcctgcctcaacgccatc
gcctgcttcctggcgctctcccgcacgccgggaacacacagcaacagcttcgagctgtgg
gtgtcggccatgctggatgacaggaagttgtcagcgagggccttgtttgacgacagctcc
cagagacagacccagctgggggtcatagttcacacagggagaagtgtctgctacaccctg
cccttccatgtctatgacacggcagactacatccgtccaatcagcttctccctgcggttc
aagatcaacaacacagaaagcggcccagtgttggatgagggttggccaaccaccgtcaaa
aaatctatcccgttctttaaagactgtggtgaagatgacgtttgtgtgactgacctggtg
ctgaaagctcatatggacatctctggaacacgacaaatgccgtacgtgatccgtagcccc
cggcgacggctgtcagtggaggtccagctgcagaaccgtctggagaatgcctacaacacc
agcctcacgctgcagtactcacgcaacctgctcttctccagcctcagcatccgggaggac
agccagtttaagattgagtgtacagctctcagctccaacagccactcctgcaacgtcagc
taccctgtattccgctcccagtccaaggtgaacttcatgttggagtttgagttcagctgc
acgtccctgctgagtaaagtacagatgaagctgcttgttgccagtgacagcgtagagaga
gaggccaccctaggagacaacaatgttcagctccagaccatcgttcagtatgaaccagac
ctctttatcagcagtgactctaatctaaaccgctacgaggtgcacccaaccaggacgata
tcagaagctatcgggcctgagttccaaacacacttccggctgcagaacctgggctgttac
tccgtgagggacctggagctgaggttaagcctgccctcggtggcggcaggagaccgagtc
ttcatgaccgtcacagacgtcttctcctacaactcctcaggggtgaactgcagtgtggag
ggagatctggcccggctgaaggccagacagagagacgtgcgacttctccaccctgaacac
atgcagcagaacgacatgctgaactgcagcaggtcgaggtgtatcgaggttgtgtgtcag
gtccagcagctcctccggggtcagacagccctgatccggatcagcaggagagtgcatgac
cacttcttcagacaggctaagtttaaggcggtgaagatagtgagcgcatatcgcctggct
gctaaggagtctaacctggtgactctgggcagcagcgccctctggagggagactgttctg
gaggtgctgaaggggcgggccatccctatctctctctggatcctgattggtagcatcatt
ggaggcctgcttttattggccctcatcattttcatcctatggaagctcgggttcttcacc
cgtaaacagagaggggatgaggatgagaagcacgaggactaa
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integrated database retrieval system
