Osmerus eperlanus (European smelt): 134023718
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Entry
134023718 CDS
T10927
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134023718 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oep02000
]
134023718 (abcb4)
04147 Exosome [BR:
oep04147
]
134023718 (abcb4)
04090 CD molecules [BR:
oep04090
]
134023718 (abcb4)
Enzymes [BR:
oep01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
134023718 (abcb4)
Transporters [BR:
oep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
134023718 (abcb4)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134023718 (abcb4)
CD molecules [BR:
oep04090
]
Proteins
134023718 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
RsgA_GTPase
Zeta_toxin
AAA_5
AAA_28
G-alpha
AAA_18
SbcC_Walker_B
DUF815
DUF87
PRK
AAA_30
NTPase_1
NCA2
ECM10
Motif
Other DBs
NCBI-GeneID:
134023718
NCBI-ProteinID:
XP_062322018
LinkDB
All DBs
Position
7:22039349..22059704
Genome browser
AA seq
1302 aa
AA seq
DB search
MDTKDKDEVSMTKCTQNGDLSDKNDEKEDKKDKKKGKKEKEPKLPMVGPIALFRFADGWD
RLLIILGTVMAMANGTVLPLMCIVFGDMTDSFIGDSVQSQNLTNISFPTSNRTLGDDMTT
YAIYYSIMGAVVLVAAYMQVAFWTLAAGRQVKRLRKLFFHRILQQEIGWFDVNETTELNT
RLTDDIYKINEGIGDKVGMLLQSFTSFFTAFIIGFAKGWKLTLVILAVSPALGISAGLFS
KVLTTFTSKEQSAYAKAGAVAEEVLSAIRTVFAFNGQQREIKRYHKNLEDAKNMGIKKAI
SANMAMGFTFLMIYLSYALAFWYGSTLILSGEYSIGSVLTVFFSVLIGAFALGQTSPNIQ
SFASARGAAHKVYNIIDNNPKIDSYSNDGFKPDSIKGNIEFKDIHFTYPSRPDAKVLNGI
CLSVRSGQTIALVGSSGCGKSTTVQLLQRFYDPQEGSVSIDGHDVRSLNVRYLREMIGVV
SQEPILFATTIAENIRYGRPDVTQKELEQASREANAYDFIMKLPDQFETLVGDRGTQMSG
GQKQRIAIARALVRNPKILLLDEATSALDSESETVVQAALDKVRLGRTTIVVAHRLSTIR
NADVIAGFQNGDIVEQGTHSELMKMQGVYHTLVTMQTFRNAEESVEVEAEPVLSEKSPSA
SSLTETTLYRRKSTKGSSFVGSEKEKEKEGETKAEEEDEKVPPVSFFQVLRLNLPEWPYI
VVGVICATINGAMQPLFAVIFSKIIAVFAETNQDIVRERSSFFSLMFAAIGGVSFVTMFL
QGYCFGKAGEILTMKLRLQAFQAMMRQDMGWFDHHKNSVGALTTRLATDAAQVQGATGVR
MATLAQNVANLGTSIIISFVYGWELTLLILGVVPVMAVAGAIQMQLLSGHAVQDKKELEQ
AGKIATEAIENIRTVASLTRESKFESLYQENLVVPYKNSQKKAHVYGLTFSFSQAMIYFA
YAGCFRFGAWLIEVNRMDFESVFLVISAVLYGAMAVGEANSFTPNYAKAKVSASHLMMLM
NRKPAIDNTSEEGDSPETFEGNVRFQGVQFNYPSRPEVPILQGLDLKVSKGQTLALVGSS
GCGKSTTVQLLERFYDALQGTVMLDKVDVKKLNIQWLRAQIGIVSQEPVLFDCSLAENIA
YGDNSRKVSLEEIQSAAKEANIHSFIETLPQKYDTQAGDKGTQLSGGQKQRVAIARALLR
NPRLLLLDEATSALDTESERVVQEALDQARQGRTCIVVAHRLSTIQNADRIAVFQGGVVV
EQGTHQQLLVRRGPYHSLVTTQMGHGRDAEGEANHRVTANMA
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggacacgaaagataaggacgaagtttccatgaccaaatgtactcaaaacggggactta
agtgacaagaatgatgagaaggaggataagaaagataaaaagaaagggaaaaaggaaaaa
gaaccgaagctgccgatggttggccctattgcgctgttccgcttcgcagacggctgggac
aggttgctgatcatcctggggactgtgatggccatggccaatgggacagtgctgccactc
atgtgcatcgtgtttggggacatgactgacagctttatcggggactccgtgcagtcacag
aacctcaccaatatctccttcccaacctccaatcggactctgggcgacgacatgacaacc
tatgccatctactattccatcatgggggctgtggtgctggtggctgcctacatgcaggtc
gccttctggaccctggctgcaggccggcaggtgaagcgcctccggaagctgttcttccac
cgcatcctgcagcaggagatcggctggttcgacgtcaacgagaccacggagctcaacaca
cggctcacagatgacatctataagatcaacgaggggataggagacaaggtggggatgttg
ctgcagtcgttcaccagcttcttcacagccttcatcatcggcttcgccaagggctggaag
ctcaccctggtcatcctggctgtcagtcctgctctgggcatctccgctgggctcttcagc
aaggtgttgacaaccttcacgtcgaaggaacagtctgcctatgccaaggccggggctgtg
gctgaggaggtgctgtcggctattaggacggtcttcgcctttaatggacaacaaagagag
attaagaggtatcataagaacttggaggatgctaagaacatgggtatcaagaaggccatc
tcagccaacatggccatgggtttcaccttcctgatgatctacctgtcctacgctctggcc
ttctggtatggcagcaccctgatcctcagcggggagtacagcatcggctccgtactcacc
gtcttcttctctgtgctgattggagcatttgcgctgggacagacgtctcctaacatccag
tccttcgccagtgccagaggggccgcccacaaggtctacaacatcatagacaacaaccct
aaaatcgacagttactcaaacgatggcttcaaacctgactccatcaagggaaacatcgag
ttcaaggacatccacttcacctacccctcacgaccagacgccaaggtcctgaacgggata
tgtctgagcgtgcggagcggccagaccatcgccctggtgggcagcagcggctgtgggaag
agcaccaccgtccagctgctgcagaggttctacgaccctcaggaaggatcggtgagcata
gacgggcatgacgtgcgctccctgaacgtgcgctacctgagggagatgatcggcgtggtg
agtcaggagcctatcctgttcgccaccaccatcgctgagaacatccgctacggcaggcct
gatgtcacacagaaggagctggagcaggcctcgcgagaggccaacgcctacgacttcatc
atgaagcttcctgaccagtttgagaccctggtgggggatcgaggcactcagatgagcgga
ggccagaagcagaggatcgccatcgcccgcgccctcgtccggaaccccaagatcctgctg
ctggacgaggccacctcagccctggactcagagagtgagaccgtggtgcaggctgccctc
gacaaggtcagactaggtcgcaccaccatagtagtggcccaccgtctctccaccatccgc
aacgctgacgtcatcgctggcttccagaacggagacatcgtggagcaaggcacccacagc
gagctgatgaagatgcaaggagtctaccacacactggtcaccatgcagaccttccggaat
gcagaggagagtgtggaggttgaagctgagcctgtcctgagtgagaagagtccgtctgcc
tcgtcgctaacggagaccaccctgtaccggaggaagtccaccaagggctcctccttcgtt
ggctcggagaaggagaaggagaaggagggggagaccaaggctgaggaggaggatgagaag
gtccctcctgtgtcgttcttccaagtgctccgtctcaaccttcctgagtggccttacatc
gtggtgggcgtgatctgtgccaccatcaacggagccatgcagccactgttcgctgtcatc
ttctctaagatcattgctgtgtttgcagagacaaaccaggacatcgtgagagagcgttcc
tccttcttctccctcatgtttgctgccatcggaggcgtttccttcgtcaccatgttccta
cagggttactgcttcgggaaagctggtgagattctgaccatgaagctgagactgcaagcc
tttcaagccatgatgagacaggacatgggctggtttgaccaccacaagaacagcgtggga
gccctcaccaccagactggcgacagacgcagcacaagtgcagggagccacaggggtgcgc
atggcaacgctggctcagaatgtggctaacctggggaccagcatcatcatctcctttgtg
tacggctgggagctgaccctgctgatcctgggcgtggtgcctgtcatggcggtggccggg
gccatccagatgcagctgctctccggccacgccgtccaagacaagaaggagctggagcag
gctgggaagatcgccacagaggcgatagagaacatccggacagtggcgtctctcaccaga
gagagcaagtttgagtccctttaccaggagaacctggtggtgccttacaaaaactcccag
aagaaggctcatgtgtatgggttgaccttctccttctcccaggccatgatctactttgcc
tacgccggatgcttccgcttcggagcgtggctcatcgaggtcaacaggatggacttcgaa
tcggtcttcctggtgatttcagctgtgttgtacggggccatggctgtgggagaggccaac
tctttcactcctaactacgccaaggccaaggtctctgcctctcacctcatgatgctgatg
aacaggaagcctgccatcgacaacacctccgaagaaggagactcaccggagacatttgaa
ggtaacgtgcgtttccagggtgttcagtttaactacccgtcccgcccggaggtgcccatc
ctgcagggcctggacctgaaggtgagcaaggggcagacattggcgctggtgggcagcagc
ggctgtgggaagagcaccaccgtccagctgctggagaggttttacgacgccctgcagggg
acagtgatgctggataaggtcgacgtgaagaagctgaacatccagtggctgcgagcccag
ataggcatcgtgtctcaggagcctgtgctgtttgactgcagcctggcggagaacattgcc
tacggggacaacagtcgcaaagtgtccctggaggagatccagagtgctgccaaggaagcc
aacatccacagcttcatagagaccctgcctcagaagtatgacacccaggcaggggacaag
gggactcagctgtcaggaggacagaagcagcgtgtcgccatcgccagagctctcctccgc
aaccctcggctgctgctgctggacgaggccacgtcggccctggacacggagagcgagagg
gtggtgcaggaagctctggaccaggcgcggcagggcaggacgtgcatcgtggtggctcat
cgcctgtccaccatccagaacgccgaccgcatcgccgtgttccagggaggggtggtggtg
gagcagggaacacatcagcagctgctggtcaggaggggaccttaccactcgctggtcacc
acacagatgggccatgggagagatgcagagggcgaggccaaccacagggtcactgccaac
atggcgtag
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integrated database retrieval system
