Osmerus eperlanus (European smelt): 134023736
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Entry
134023736 CDS
T10927
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134023736 (cdh17)
Cell adhesion molecules [BR:
oep04515
]
Cadherins
Major cadherins
134023736 (cdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Cadherin_CELSR2_9th
RibLong
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
134023736
NCBI-ProteinID:
XP_062322072
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Position
7:22270657..22283495
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AA seq
866 aa
AA seq
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MHLLLFSLLIGIAAGGGLDDKKGPLEDKVLDVPEAAPVPYALYQFHAVNPDVNGFRVSGD
SEGKIQISRDGWLYLEEALVWAHAHTHTLQVEALVDTEPVEGPFTVTINVLDINNHAPSF
NQTDYVAVIREGSVAGVPFTRVFASDLDDPESTNSHLSYSLVNQIPNKHSTPFFQINTET
GEISTTEEGQRLLKAREGVVYSRGQDGSSHDALKRKFDEYCSPIKDVPYELNPFYTCVER
AEMRRLNPLEDPDFVLFVRVEDLGGQSENALSSNTRVNVAVQQNLWVTPGPITIKEHLVT
TYPMLIAKVQSNTHSALYRLVQKERLLPFPFSVTPEGEVMLTEQMDREEKSRYTVVVLAE
DHEGNELDPPMEIQVLVEDVNDNPPVCLLDETVFEIQENELPGSPLGQLQVSDADEENTV
NSLLSYTLLIQAPETSSPMFSIDDITGRVQSRQLLKRRDATEYRLTVRVHDPGFSTECKV
VIKVIDVNNEVPIFEQSDYGSHTLSEDTPVGHTLLTVKATDADDPGSGSSRIEFHITAGN
EDGVFAMETESNGEGRIVLVKPLDFEITPSTRLQIDARNPEPLMAGIQYDNQSTAFVTVE
INDVDEAPEFDMDILDVVLPENTSLGASVVTVGAKDPEGKLIEFKLEGDTKSWLEIDPAT
GEIKTKAKLDREVLEAFDVTVIAFEKANPQLSSECVVSVRLLDVNDNVPKLLETQAFICV
KKPKPVILSATDADSAPYSQPFTFTFPQSKKSPNWDISSIDGTSAKLTMKKSPTEDKTFV
IPINIKDSAGMGVTHKFEVRVCNCTELGYCYTKPSEHGFKYGIPTTIGILGGTLGFIVLL
LVIVFHRIKKDNEKRRLQEGDTQSML
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgttgctgttctcgctcctcatcggcatagctgcaggtggaggtctggatgac
aagaagggacccctggaagacaaggttctggacgttccagaggccgctcccgtaccctac
gctctttatcagttccatgcagtcaaccctgatgtgaacggcttcagggtgagcggagac
tcggaggggaagatccagatctccagagatggatggctctacctggaagaggctttagtc
tgggcccacgcacacacacacactctgcaggtggaggcgctagtcgacactgaaccagta
gagggtccgttcactgtcaccatcaacgtgctggatatcaacaaccacgccccttccttc
aaccagacagactatgtggctgtgatcagggaaggcagtgttgcaggtgttccattcacg
cgtgtgtttgcatctgacctggatgaccctgagtcgaccaactcccatctgagctacagc
ttggtcaaccagatccccaacaagcacagcacccccttcttccagatcaacacagagaca
ggggagatctccaccaccgaagagggacagcgcttgctgaaagccagagagggtgttgtg
tattccagaggtcaggatggcagcagccatgatgccttgaagaggaagtttgatgagtac
tgttcccctataaaggatgtcccatacgaactcaaccccttctacacctgtgtggagaga
gcagagatgcgtaggctaaatcccctggaggacccagacttcgttctgtttgtgcgtgtg
gaggacctgggcgggcagtcagagaatgctctcagctccaacaccagagtcaatgtcgct
gtgcagcagaacctgtgggtcacccctggaccaatcacaatcaaggaacatctagtgacc
acataccccatgttaattgctaaggtccagtctaacacgcacagcgccctctacaggctg
gtgcagaaggagcgcctgcttcctttccccttcagtgtcactcccgagggagaggtcatg
ctgactgagcagatggacagagaggagaagagcaggtacactgtggtggtgctggctgag
gaccatgaagggaacgagctggaccctcccatggagatccaggtgctggtggaggacgtg
aatgacaaccctccggtctgcctgctggacgagaccgtgtttgagatccaggagaacgag
cttccaggaagccctctgggccagctgcaggtcagcgatgcggacgaggagaacacagtc
aactccttgctgtcctacacgctcctgatccaggctcctgaaaccagctcccccatgttc
tctatcgatgatatcacgggacgtgtccagtccagacagctgctcaagaggagagacgcc
accgagtatcgtctcaccgtgagagtccacgacccaggtttcagcacagagtgcaaggtt
gtcatcaaggtcatagacgtcaacaacgaagtgccaatctttgagcagagcgattacggt
agccacaccctctctgaggacaccccagtaggccacaccctcctgacagtgaaagccacg
gatgctgacgacccaggcagcgggagctcacgcatcgagttccacatcaccgctggcaac
gaggacggagtctttgccatggagacagagtccaacggagagggcaggatcgttcttgtc
aagcctctagactttgagatcacaccctccaccagactccagatcgacgcccggaaccca
gagcccctgatggccggaatacagtacgacaaccagtccactgccttcgtcacggtggag
atcaatgatgtggatgaagctccggagtttgacatggacattctagacgtggtcctacca
gagaacaccagcctgggagcctctgtggtcacagtaggggccaaggacccagagggaaaa
ctcattgaattcaagctggaaggtgacaccaaaagctggttagagatcgatccagccaca
ggcgagatcaagaccaaggccaagctggacagagaggtgctggaggcctttgatgtcaca
gtcatcgcctttgaaaaagccaatccccagctgtcctcggagtgtgtggtctctgtgcgc
ctgttggatgtgaatgacaacgtgcccaagcttctggagacccaggccttcatctgcgtc
aagaagcccaagcctgtcatcctgtcagccacggatgcagatagcgccccctacagccag
cccttcacgttcaccttcccccagagcaaaaagtctcctaactgggacatcagcagcatt
gatggtacatctgctaaactgaccatgaagaaatctccaacggaggacaaaacctttgtg
atccccataaacattaaggacagcgcagggatgggcgtcacacacaagtttgaggtgagg
gtgtgtaactgtacagagctggggtactgttacaccaaaccaagtgagcacggcttcaag
tacggaattcccaccaccatcgggatccttggcgggactctgggattcattgtcctcctg
ctggtcatcgtgttccaccgcatcaagaaggataacgagaagaggagactgcaggaggga
gacacacagtccatgctgtag
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