Osmerus eperlanus (European smelt): 134023831
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Entry
134023831 CDS
T10927
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 1-like
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04010
MAPK signaling pathway
oep04020
Calcium signaling pathway
oep04148
Efferocytosis
oep04218
Cellular senescence
oep04310
Wnt signaling pathway
oep04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134023831
04310 Wnt signaling pathway
134023831
04020 Calcium signaling pathway
134023831
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134023831
09143 Cell growth and death
04218 Cellular senescence
134023831
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
134023831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134023831
Transcription factors [BR:
oep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
134023831
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
134023831
NCBI-ProteinID:
XP_062322173
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Position
7:13601944..13624035
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AA seq
641 aa
AA seq
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MQDSSFLRVNSKFNFGPPEKDRGFEYLTCLAAEMKSAEEDAYSYTPNVSLSLPLGMGNPC
LSSQYHTLQSSPLISVSSCHQGGYSLHQDPTPQGYYLAPSLRSTTAPALESPRIEITAYG
QFPEEEVEESAGLGHLVKRGVNSIVTLTLPNADGYRDPSCLSPASSVSSRSCNSEASSYE
SGFYNYDNSPQTSPWQSPCVSPKGSSSLLSCPHPAVSPRHSPSASPQIGASAEEVWGGGQ
QQQPPPRGSRPNSPASSGLGGGGGGGGSSNGKRKYSFNGAPYRQPSYSPNQDRSPAPSPR
GSPRVSVTDDSWLANTNQYTNSAIVAAINALTTDGVGELGEGVIPVKARKTTLEHSPCMG
LKVEPGADEMGPVSELCQEDYSSRLPFKKESYCGGFLEVPQQPYSWSKPKPYLSPSLPAL
DWQLPSCSGPYSLQIEVQPKSHHRAHYETEGSRGAVKALSGGHPVIQLYGYLESEPLTLQ
LFIGTADDRLLRPHAFYQVHRITGKTVSTASHEVLQSCTKVLEIPLLPENNMRAIIDCAG
ILKLRNSDIELRKGETDIGRKNTRVRMVFRVHITQPSGRTVSLQASSNPIECSQRSAQEL
PLVERQSVDSYPATGGKKMLLSGHNFQPDSKVVFLEKAQAP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattccagctttttgagagtcaactccaagttcaacttcggaccaccggaaaaa
gatcgaggatttgagtatctcacctgtctcgccgccgaaatgaagtctgcagaagaagat
gcttacagctacactccaaacgtcagcctgtccctgcctctgggcatggggaacccctgt
ctgtccagccagtaccacaccctgcagtccagcccgctcatctccgtgtcctcctgccac
caggggggctacagtctccaccaggaccccaccccccagggctactacctggccccaagc
ctccggtccaccacggcgcccgccctggagagcccccgcatcgagatcaccgcctacggg
cagttcccggaggaggaggtggaggagagcgccggcctgggccacctggtgaagcggggg
gtgaactccattgtgaccctgaccctgcccaacgccgacggctaccgcgaccccagctgc
ctcagccccgcctccagcgtgtcgtcgcgcagctgcaactccgaggcgtcctcgtacgag
tcgggcttttacaactacgacaactcgccccagacctcgccctggcagtcgccttgcgtc
tcccccaagggctcctcctccctgctctcctgccctcaccccgccgtctccccccgccac
tccccctccgcctccccccagatcggggcgagcgccgaggaggtgtgggggggcgggcag
cagcagcagccgcctcctcgtggctcccggcccaactcccccgccagcagcgggctcggg
ggcggcggaggcggtggcggcagcagcaacgggaagaggaagtacagcttcaacggcgcc
ccctacaggcagccgtcctactcgcccaaccaggaccgctccccggctccctcgccgcgc
ggctcgcctcgtgtcagcgtgacggacgacagctggctggccaacaccaaccagtacacc
aactcggccatcgtcgccgccatcaacgccctgaccaccgacggcgtgggggagttgggc
gagggggtcatccctgtcaaggcccgcaagaccacgctggagcactccccctgcatgggc
ctcaaggtggagccgggcgcggacgagatgggccctgtgagcgagctctgccaggaggac
tactcctctcgcctgcccttcaagaaggagagctactgtggagggttcctggaggttcct
cagcagccgtactcctggtccaagccaaagccttacctcagtccctctctgccagcgctg
gactggcagctgccctcgtgctcagggccctacagcctgcagatcgaggtgcagcccaaa
tcccaccaccgcgcccactacgagaccgagggcagccgcggggccgtcaaagccctgtcc
ggggggcaccccgtcatacagctctatgggtacctggagagcgagcccctcaccctgcag
ctcttcatcggcacggcggacgaccgcctcctccggccgcacgccttctaccaggtgcac
cgcatcacggggaagacggtgtccacggccagccacgaggtcctgcagtcctgcaccaag
gtcctggagatccccctgctcccggagaacaacatgagggccatcatcgactgtgcgggc
atcctgaagctgaggaactcggacatcgagctgcgtaagggcgagacggacatcgggcgc
aagaacacgcgtgtgaggatggtgttccgcgtgcacatcacccagcccagcggcaggacc
gtgtctctgcaggcttcctccaaccccatcgagtgctcccagcgctcggcccaggagttg
cccctggtggagaggcaaagtgtggacagctaccctgccacagggggcaagaaaatgcta
ctcagtggacacaacttccagccagactctaaggtggtgttcctggagaaggcccaagcc
ccttag
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