Osmerus eperlanus (European smelt): 134023950
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Entry
134023950 CDS
T10927
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134023950 (irx4a)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134023950 (irx4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
134023950
NCBI-ProteinID:
XP_062322285
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Position
7:15798913..15803359
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AA seq
475 aa
AA seq
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MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSISDSGVAATAQTPVYCPVYESRLLATA
RHELSSAAALGVYGNPYTSGQGYGNYVTYGTDASAFYSLGTFDSKDATASAHAGITQAAA
YYPYDPTLGQYQYDRYGSIDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRYDEDDDGSQEEQIKSETNDDEN
TSREDKDLQLSDLEDFDTIESESSECELKHQYHLNTHMTTTDCPNGHIKDTSLKISIPVS
LGGEQDSRKTCLKTSSEDCEHDVSNGRQVKTCYEQGHQILDGKPRIWSLAQTATSLNQTE
YPSCMLRCQPTMSPSPVADSPVHVNDRQDSPVTTLRNWVDGVFHDPLFRHSTLNQALTNT
SVSWTTTTKGSILETGALDRSLGNNVVKGHAPMQHQDSTKDTMNFPKNVNKLFCS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccttactcgtctgcaccacaattcctcatgacaacc
aactccttgacaacttgctgcgaatcaaccggcagatccatctcggattccggagttgca
gccactgcccagacgccggtttactgccccgtttacgagagcagactgctggccaccgcc
aggcacgagcttagttccgccgcggctctgggtgtgtacgggaacccctacacgagcggt
caaggctatggaaattacgttacatatggaaccgatgcctccgctttctactcactgggt
acattcgattcgaaagatgccacagcatctgcgcatgcggggataacacaagcagctgct
tactacccatatgaccccaccctgggccagtatcaatacgacagatacggatccatagac
ggaggaaccaggaggaagaacgcgaccagggagacgaccagcaccctgaaagcatggctc
caggagcacaggaagaacccctatcctaccaaaggagagaagatcatgctggccattatc
accaagatgaccctgacgcaggtctctacctggttcgccaacgccaggaggagactgaag
aaggagaacaagatgacctggccccccaggaacaaatgttcagacgagaagaggtatgat
gaagatgacgatgggtcgcaggaggagcagatcaaaagtgaaaccaacgatgatgagaac
acgagtcgagaggacaaggatctacaactcagcgatcttgaagatttcgacacaattgag
tctgaaagctccgaatgcgagctcaagcatcagtatcacttaaatactcacatgacgacg
actgactgccctaacggtcacattaaagacacttcattaaagataagtattccagtgtct
ctgggcggagagcaggactcgagaaaaacctgtctgaaaacaagttcggaggattgtgag
cacgatgtgagcaacggaagacaagttaaaacgtgctacgagcaaggccaccaaatacta
gacgggaaaccaagaatctggtcgctggcccaaactgcaacttctttgaaccagactgag
tatccgtcgtgtatgctgagatgtcagccaaccatgtccccgtctcccgtggccgactct
cctgtgcacgttaatgacaggcaggattcgccggtcacaactctcagaaactgggtagat
ggggttttccacgaccctctgtttaggcacagcactttgaatcaggctttgaccaacact
tccgtttcttggaccacgaccaccaaaggctcaatactggagacaggtgcgctcgaccgc
tctcttggaaacaacgttgtcaaaggacacgctcccatgcagcaccaggattccaccaag
gacactatgaatttccccaaaaatgtgaacaaacttttctgttcgtaa
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