Osmerus eperlanus (European smelt): 134024087
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Entry
134024087 CDS
T10927
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04621
NOD-like receptor signaling pathway
oep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134024087 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134024087 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oep04054
]
134024087 (nod1)
Pattern recognition receptors [BR:
oep04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134024087 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_4
LRR_6
NOD2_WH
AAA_16
NTPase_1
NPHP3_N
AAA_22
ATPase_2
AAA_30
NB-ARC
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
134024087
NCBI-ProteinID:
XP_062322493
LinkDB
All DBs
Position
7:2855482..2867522
Genome browser
AA seq
947 aa
AA seq
DB search
MRVKACEATVPQLMSTVQLLTWNRELLVSQVKSTQCILDNLLKSGFFCQEDVETVQPAVT
KADQVRKILELVQSKGEPACEYFLYILYKVYDAYIDLQPWLQEINYQPPDFIQEIPVVNT
DPISRYCEKLRHELRRDTRFIASYSHREETLLEELYTDTQMELLDGHNESLGYLESLDQL
LGERGVFNPEAETVFVTGDAGVGKSLLLQKVQNLWSKRELRTDVMFFFKFRCRMFSTFKK
TDEISLRDLLFKHNCYPDQDLDNEVFGYILRFPEKVLFTFDGYDEVQGELDLVNVPEVVS
PEDKSHPLLLLINLLCGKLLKGSQKVLTARTGTEVLAKVIRKRVALQGFSLAQLKTYTSL
HFKEQEHRDLVWVQLDASPHLCGLCSTPLFCWIVFKSFKHLHTVYDDFQLPETCVTLTNI
FLLLSEVFLSRSALPPAGMLKRSTRCAAETFQAGSRRLVAFAKLALLGLERGGFVFSLEE
AVSCGLAEADLHVGFLRPVGCYDGTGSSDAFEFLHLTLQSFLAAFSLVLEEQAGVSSTLR
FFTKCSRKKDTPCLPWASCVRRSSKPRGTDPFKTNDHLQFANLFLCGLLAKANAGLLEHL
VSPALLDRKRSILKSYLSTSVRCHLRGLPVHTTDNEGSKVHVLPNFLWMLRCIFETGSRE
VAQLTAKGITASYIKLGYCNVYSGDCSALNYVLQHRKKRLGVDMDNNNISDYGVKQLRPS
LSTMTVVRLCVNQISDSSVEILAEELTKHKVVEVLGLYKNLITDVGAELVAQMIEECPKL
RTVKIGSNKITSVGGTYLAQAIQKSSCIFDVGMWGNTIGDEGAVAFAEALRHHPSLTNLS
LSANGITSRGGRSLAQALKENTVLRIFWLVQNQLTDDVAPDMAELIKANTGLSHLWLINN
QLTVAGMQILSDALPHNTALKEICVKGNSVSQEEEALFKEQPRLRFH
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgaaggcatgtgaggccaccgtgcctcaactgatgtctaccgtgcagcttctc
acgtggaaccgcgagctcctggtctcacaggtgaagagcacgcagtgcatcctggacaac
ctgctgaaaagcggcttcttctgccaggaggacgtggagacggtgcagcctgctgtcaca
aaggcggaccaggtgcgtaaaatcttggagcttgtccaaagcaaaggagagccggcctgc
gaatatttcttatacattctctacaaagtttacgacgcctacatcgacctccagccatgg
cttcaggagatcaactatcagccaccggacttcatacaggagatacccgtggtcaacaca
gaccctatcagtcgctactgtgagaagttgaggcacgagctgcggcgggacacccgcttc
atcgcctcgtactcccatagggaagagacgctgctggaggagttgtacaccgacacccag
atggagctgctggacggacacaacgagagcctgggctacctggagagcctggatcagctc
ctgggggagcggggggtcttcaacccagaggccgagacagtcttcgtgaccggggacgcc
ggtgtgggcaaatccctcctcttgcagaaggtccagaacctgtggtcgaagagagagcta
cggacggacgtcatgttcttcttcaagttccgctgcaggatgttcagcaccttcaagaag
acggacgagatctccctcagagacctgctcttcaagcacaactgctacccggaccaggac
ttggacaacgaggtgttcgggtacatccttcgcttcccggagaaggttctcttcacattt
gatggctacgacgaggtccagggggagctggatctggtgaatgtgccggaggtggtctcg
ccagaggataagagccaccctctcctgctgctcatcaacctgctctgtgggaagctcctc
aagggctcccagaaagtcctgaccgctcggacggggacagaggtcctggcaaaagtgatc
cgcaagcgggtagctctccagggcttctccctggcccagctgaagacctacacgtccctg
cacttcaaggaacaggagcacagagacctggtgtgggtccagctggacgccagcccccac
ctttgcggcctgtgctccacccccctgttctgctggatcgtcttcaagagcttcaagcac
ctgcacaccgtgtacgacgacttccagctgcccgagacctgcgtcacgctcaccaacatc
ttcctcctgctgtccgaggtcttcctcagccgctcggcgctgccgccggcggggatgctg
aagaggagcaccaggtgcgccgccgagaccttccaagccggatcgcggcggctggtggcg
ttcgccaagctggccttactgggcttggagaggggaggcttcgtgttcagcctggaggaa
gcggtgtcctgtgggctggcagaagcagacttgcacgtgggcttcctccggccagtcggt
tgctacgacgggaccggttcctcggacgcgtttgagttcctccacctcaccttgcagtcc
ttcctggcggccttttccctggtgctggaggagcaggctggggtgagctccacgctgagg
ttcttcacaaagtgcagccggaagaaagacactccctgtttaccgtgggcctcctgtgtc
cggagatcctccaagcccagaggaacagatccattcaaaaccaacgaccacttgcagttc
gccaacctcttcctctgcgggctgctggccaaggccaacgcaggcctgttggagcacttg
gtgtccccagcgttgctggacaggaagcgctcgatcctcaagtcctacctttccaccagc
gtcaggtgccacctgcgaggccttcctgtccacaccacggacaacgagggcagcaaggtg
cacgttctgcccaacttcctgtggatgctcaggtgcatcttcgagacaggaagtagagag
gtggctcagctgacagccaagggcatcacggcgagctacatcaagctggggtactgcaac
gtctactctggcgactgcagcgccctgaactacgtgctgcagcacaggaagaagaggctc
ggcgtggacatggacaacaacaacatcagcgattacggagtcaagcagctgcggccctcg
ctcagtaccatgactgtggtgaggttgtgtgtcaatcagatctccgacagcagcgttgag
atcctggctgaggagctgaccaagcacaaagtggtggaagttttaggactctacaagaac
ctcatcaccgacgtgggagctgagctggttgctcagatgatcgaggaatgtccgaaacta
cgaacagtcaagattggcagcaacaagatcaccagtgtgggagggacgtacctggcccag
gccatccagaagagctcctgcatttttgatgttgggatgtgggggaacactataggagat
gagggagccgtggcgtttgcagaggccttgaggcatcaccccagcctgaccaacctgagc
ctctcagccaatggcattacctcaaggggggggaggagcctggcccaagcattgaaggaa
aacacggttctcaggatcttctggcttgtgcagaatcagctgactgatgatgtggcacca
gacatggcagaactaatcaaagccaatacaggactctcacacttatggctcatcaacaac
cagctgactgtggcgggaatgcagatcctgtctgatgcccttccccacaacacggccctc
aaagagatctgtgtgaaggggaacagcgtgagccaagaggaagaggcgttgttcaaggag
cagccacggctccgcttccactga
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