Osmerus eperlanus (European smelt): 134024114
Help
Entry
134024114 CDS
T10927
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
oep
Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134024114 (wdtc1)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134024114 (wdtc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_NOL10_N
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_Aladin
DSE1_N
PAC11
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
TPR_19
Beta-prop_RIG_2nd
TPR_1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_EIPR1
TPR_2
CFAP251_N
ASA1
Beta-prop_WDR19_1st
TRM82_WD
ANAPC3
Beta-prop_SCAP
TPR_17
Beta-prop_Vps41
TPR_6
TPR_16
Beta-prop_IFT140_1st
RMD1-3
Barstar
TPR_BSK1_C
CFAP70_TPR_C
TPR_9
Motif
Other DBs
NCBI-GeneID:
134024114
NCBI-ProteinID:
XP_062322533
LinkDB
All DBs
Position
7:3608165..3616905
Genome browser
AA seq
674 aa
AA seq
DB search
MICGEAMSAVNITRDILHRQIRDKRALGFQRVYHVTDPFIKRLGLEAELQGHTGCVNCLE
WNEKGDLLASGSDDQHVIIWDPFKHKKLTTMHTGHAANIFSVKFLPHSGDRIIVTGAADT
KVHVHDITAKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRESSKRSEVL
IDLTEYCGQLVEAKCLAVNPRDNNYLAVGANGPFVRLYDIRMIHNHRKSMSQSTSAGVHT
FCDRQKPIPDGAGQYYVAGHLPVKLPDYNNRLRLLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQKPYTYMLPKKCQPAADIQNGKTTNGVSNGIHLPASCLRLATSKIYSGSGELPP
HVESIKQRANEAFARGQWTQAIQLYSLGIYEAGRNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKALSLNPAHLKAHFRLARCLFELKYIAEALECLDDFKGKFPDQAHSTACDALDKDIK
AALFSKNDSEDKKASSSIRFHTFSRKESIPEDEVVLRERSFDYKHRYCGHCNTTTDIKEA
NFFGSKGQYIVSGSDDGSFFIWDKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPV
VRLWNPRPETESENGRVVEDMEGAAQANQRRMNADPLEVMLLNMGYRITGLGNRGPEGSD
DEDSSEGQVQCRPS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtggtgaggccatgtctgctgtgaacatcaccagagacatcctgcacaggcag
atccgagacaagagagcattgggctttcaaagggtctatcatgtgaccgacccattcatc
aagagacttggactggaggccgagctgcagggtcacacagggtgtgtcaactgcctggaa
tggaatgaaaaaggagatttgctggcgtcaggctccgatgatcaacatgtcatcatctgg
gatcccttcaaacacaagaagctcaccactatgcacacaggtcacgctgcaaacatattc
tcagtgaagttccttcctcactctggggatcgcatcatagtgacgggtgctgcggacacc
aaggttcacgtccatgacatcaccgccaaggaaaccatccacatgttctcagaccacacc
aaccgggtgaaacgcatcgccacggcgcccatgtggcccaacactttctggagcgcggca
gaagacggcctaatcaggcagtacgacctgagggagagcagtaaacgctccgaggtgctc
atcgacctgacggagtactgcggccagctggtggaggccaagtgtctggcagtcaacccc
cgagacaacaactacctggcagtgggcgccaacgggccctttgtccgtctctacgacatc
cgcatgatccacaaccacaggaagtcgatgagtcagagcacttcggcaggggtgcacacg
ttctgcgaccgacagaagcccatcccggacggagccgggcagtattatgttgcagggcac
ctgccagtcaagcttcccgactacaacaatcgcctgagactcctggtggccacgtatgtg
acctttagccccgacggcactgagctgcttgttaacatgggcggggaacaggtgtaccta
tttgacctgacgttcaagcagaagccatacacctacatgctgcccaaaaagtgccagcca
gccgcagatatccagaatggaaagacgaccaatggcgtctccaacggaattcacttgcct
gccagttgccttcgattggctacgagcaagatctactctggctccggtgagctccctccc
catgtggagagcatcaagcagcgggctaacgaggcgttcgcccggggccagtggacccag
gccatccagctgtacagcctggggatctacgaggccggccgcaatgccatgctgtacggg
aaccgcgccgccgcctacatgaagcgcaagtgggatggtgatcattacgatgccctgcgt
gactgtctgaaggctctgtctctaaaccccgcccacctgaaggctcacttcaggctggcg
cgctgcctctttgagctcaagtacattgccgaggctctggagtgtctggatgactttaaa
gggaagttccccgaccaggcccacagcacggcctgcgatgcgctggataaggacatcaag
gctgctctgttctccaagaacgactctgaagacaagaaggccagcagctccatccgcttc
cacacgttcagccgcaaggagtccatcccagaagacgaggtggtcctcagagaacgcagc
ttcgactacaagcaccgctactgcggacactgcaacaccaccacagacatcaaggaggcg
aacttctttgggagtaaaggccagtacatcgtgagcggctcggacgacggctcgttcttc
atctgggacaaggagaccaccaacctggtgaggatcctgcagggggatgagtccatcgtc
aactgcctccagccacaccccagttactgtttcctggcaaccagtggcatcgacccagtg
gtgaggctgtggaaccctcggcccgagacggagagtgagaacggacgggtggtggaggac
atggagggcgcggcccaggccaaccagcggcggatgaacgccgaccccctggaggtgatg
ctgctgaacatgggctaccgcatcacaggcctcggcaaccgtgggccggagggctccgac
gacgaggacagctccgagggccaagtgcaatgccggcccagttag
DBGET
integrated database retrieval system
