Osmerus eperlanus (European smelt): 134024198
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Entry
134024198 CDS
T10927
Symbol
tnxba
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134024198 (tnxba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134024198 (tnxba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oep00536
]
134024198 (tnxba)
Glycosaminoglycan binding proteins [BR:
oep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134024198 (tnxba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
EGF_Teneurin
EGF_2
EGF_TEN
TusA
EGF_Tenascin
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
134024198
NCBI-ProteinID:
XP_062322692
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All DBs
Position
7:complement(5230194..5237799)
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AA seq
1085 aa
AA seq
DB search
MLFTLALLLLVTPLPSLQTPTNEKRNSTGSDQPKPNVVLTLVKPKPVAVIAKQPNKTPRP
TPKPTINLTVLTPSVPTKPPAVSPPKTVKDKTPPAPPPPAIKVILTDGCLHKDIQSHSSS
TPEQGQELQLELKPGSPLVMTHKISLVPGGCTGGCVAEMAALKGRVSRLEKEMSSIKEQC
PCSKVNCPNDCGGRGKCEKGKCVCLPGFLGLDCSKCAPGSDCSKKDVKDKVKTTVEKVTP
ESNVNKTSVSSTEVKKVAKEDDSKTKIKVVTVTAVKPQVTVTKTTSKAGKTKITLGLPTV
GQVLLKHNGGKKQKEARKGETKVFLPKKTPKPDLKGKVTVQDQPLNDTITPTTVKKSNGT
TKGTDTANKTRPRKENLEQSTLSEKNSTQTSVKKPTKKVNESVTKVTVSVNNTQTVTGKK
KIPQRSQYLVNVTTPSPEVKVPKVNKTMVLLVNATRRPLATGLGSVKVQNISSYGFTLTW
SAPQAMFKNFTVIRRELRAEGEEEEEAEDGPLGGQDKGLATANTTESAVNGTASSTKVLS
GSKSKADGKHTRKVSMALPGGVRSVEFGNLHPLTRYALSIYGTAPGKRSKIHRVTITTGP
EPPTDMVFSNVTESSLAVSWTRPKSALTGFQITYTNIVTAESSSVSVNAQQSHVVLPMLS
ASSSYVVTVTSVLGKIRSDPAVAIMTTVPAPPVQLQAINITDTRAVLQWTPSLGKVDRFI
ISYESARTPNVTVSVMVSGNSVEHHLKGLQRATLYTVKVLSEKDSLQSTALATTFTTANM
VKASDVDAHSAVITWKAPAVAFHSYRVTYQLAGGEAKEVILDPSASEYKLTGLLAMSRYT
VLVQGEREGEYTSVIAAEFTTAKLRFPFPTECSQELLNGALQSGEVDIYPQGKEGGAVRV
YCDMETDGGGWTVFQRRVNGKTDFYRTWSEYTHGFGNLSEEFWLGNELLHNLSSMGPVSL
RVDLRSGNDTAYAHYSNFTIGSEARHYAIEVFGYTGTAGDSMRYHNGRPFSTKDKDPNPL
GIHCARAYMGGWWYKNCYKTNLNGLYGVNSNNQGIVWIDWKGKDASVGFAEMKFRPAGFS
PATHG
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttacactggccctgctcctcctggtcaccccattaccctctctccaaacccca
accaatgagaagaggaactccacaggaagtgaccagcccaagccaaatgtagttctcacc
ctggtgaaaccaaaacccgtagctgtgatcgctaaacaacccaacaagacccctcgcccc
acccccaaaccaaccatcaacctgaccgttttgaccccctcagtccctaccaagcccccc
gcagtcagtcctcccaagactgttaaagacaagaccccccctgccccaccacctcctgcc
atcaaggtgatccttaccgacggctgcctccacaaggacatccagagtcactcttccagc
accccggagcagggccaggagctgcagctggagctgaagcctgggtctccactggtcatg
acccacaagatcagcctggtgcctgggggctgcacagggggctgtgtggccgagatggct
gccctgaaaggacgtgtgtccaggctggagaaggagatgtcgtccatcaaggagcaatgt
ccctgctctaaggtgaactgcccgaatgactgtggcggacgaggtaaatgtgagaaggga
aagtgtgtctgcctcccaggattccttgggcttgactgcagcaagtgcgcccccggatct
gactgcagtaaaaaggatgttaaagacaaggtgaagacaacagtggagaaggtaacccct
gagagcaatgttaacaagaccagcgtctcgtctacagaggtgaagaaggtagcaaaagag
gacgactccaaaaccaaaatcaaagtggtcaccgtcactgcggtaaaaccgcaggttacg
gttactaagactaccagcaaggctggaaaaaccaagattacactgggccttccgacagtg
ggacaggtcctcttaaaacacaatggaggaaaaaagcagaaagaagctcgtaaaggcgaa
acaaaagtttttcttcctaagaaaacacccaaaccagaccttaaaggcaaagtgaccgtt
caggaccaacctcttaacgacaccattaccccgactactgtgaagaaatcaaacggcacc
accaaaggcacagacactgcgaacaagactcgcccaaggaaggagaacctagagcagtcc
actctgtctgagaagaactccacccagacatctgtgaagaaacccaccaagaaggtgaat
gagagcgtcaccaaggtaacagtgtctgtcaacaacacccaaacggtgacaggcaaaaag
aaaattccacagaggagtcagtatttagtgaacgtgaccactccgagtcccgaggtcaaa
gtcccgaaggtcaacaagacaatggtgctgctggtgaatgccaccaggaggcctctggcg
accggcctcggttcggtcaaggtccaaaacatctcctcctacggcttcactctcacgtgg
tccgctccgcaggccatgttcaagaactttaccgtgatcagacgggagctgagggcagag
ggcgaggaagaggaagaagcagaggatggacctcttggaggacaagacaaaggactggcg
acagcaaacaccaccgagagtgctgtcaacggaaccgcgtcctccaccaaggttctcagt
ggctccaagtctaaggctgacggcaagcacaccaggaaagtctccatggctctcccagga
ggtgttcgctcggtggagtttggcaacctgcatcctctgacccgctacgcgctcagtatt
tacggcacggctcctggaaagaggtccaaaatccacagagtgaccatcaccacaggtcct
gagccccctacagacatggtcttcagcaacgtaaccgagtcctccctcgctgtgtcctgg
accagacccaagagcgccctcaccggcttccaaatcacctacaccaatattgtcactgca
gagagcagctcagtgtcagtcaatgcccagcagtcccacgtggtcctgcccatgctgtct
gcaagctcctcgtatgtggtcaccgtgacctccgttctggggaagatccggagcgaccct
gccgttgccatcatgaccacagtgcccgctccccctgtccagctccaagccatcaacatc
accgacaccagagcggtgctgcagtggacgcccagcctgggaaaggtcgaccgtttcatc
atcagctacgagtcagccaggacgcccaacgtgacggtgtcggtgatggtgtcggggaac
tcggtggagcaccatctgaaaggccttcagagagccaccctgtacacagtcaaggtgctg
agcgagaaggacagtctccagagcacggcattggccaccaccttcacaaccgcgaacatg
gtgaaggccagcgatgtcgacgctcattccgctgtgatcacatggaaagccccagctgta
gcgttccacagctacagagtgacctatcaactggcaggaggggaggccaaggaggttata
ctggacccatctgcgagtgagtacaagctaaccggactgctagccatgtccaggtacact
gtgctggttcagggagagagggaaggagagtacacctctgtgatcgccgcagagttcacc
acagccaagctgcgcttcccattccccacggagtgctcccaggagctgctcaacggcgcc
ctgcagtctggggaggtggacatctacccccagggcaaggagggaggggccgtcagggtc
tactgcgacatggagactgacggagggggctggacggtgttccagaggcgagtgaacgga
aagaccgatttctacagaacctggagtgaatacacccacggcttcggaaacctcagcgag
gagttctggctcggaaatgagctgctgcacaacctgagcagcatgggccctgtcagtctg
agggtggacctgcgctcaggaaatgacacggcgtacgcacactactccaacttcaccatc
gggtccgaggcccggcactacgccattgaggtcttcggctacaccggcactgcaggtgac
tctatgaggtatcacaatggtcgcccgttctctaccaaggataaagaccccaaccccctg
gggatccactgtgccagggcctacatggggggctggtggtacaagaactgctacaagacc
aacctcaatggtctctacggtgtcaacagcaacaaccagggcatagtgtggatagactgg
aaggggaaggacgcttccgtcggcttcgccgagatgaagttcagaccagctggattctcc
cctgccacccatggctaa
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