Osmerus eperlanus (European smelt): 134024459
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Entry
134024459 CDS
T10927
Symbol
tdrd6
Name
(RefSeq) tudor domain-containing 6 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
oep Osmerus eperlanus (European smelt)
Brite
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134024459 (tdrd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SGF29_Tudor
SMN_Tudor
Motif
Other DBs
NCBI-GeneID:
134024459
NCBI-ProteinID:
XP_062322874
LinkDB
All DBs
Position
8:5644362..5655290
Genome browser
AA seq
2291 aa
AA seq
DB search
MCSIPELPTPGSNVSVLIKRVNLNPLCVLVEFWCNFDQERKIAHQCLRKDIQCPREAFRE
LEGNPGDQCLVSVFETWYRARIVSKNGSNYNVFLIDEGRSLSATTGMLAWGHSEFFRLPP
EVEFCVLSNVLPLSTENRWSPVALEFLKSLCGQQATASIQDVLVPHRTFLLDIPSISRQM
YEMGFAKKLPTERFRLFVSRSLQAHSGAATSNKPQQMSMKNDPLDRHELMEKQQQYMYPE
LQTETVETVIITEVTNPLRLFCQLKVFSQELRKLTEQITQYYEGRVQTGLSRPQTLGSPC
ASRGSDGKWYRSVLQQLFPANSVVEVLQVDNGKKQFVQMENIRFLAAEFFRMPVVTYVCS
LHGIIDKGVGWTVPQIDYLKTLLLNRTVIAKFEYQSLSEGVHYVTLYGDENMCINTMFGS
KEKCILECDGSHGDYAVCSKLAPKPKHLGGMETRVSPPSGDATETRVKFTAEDLQLQSSH
VAVVQHVSNPSEFWIQTQRYAVEFDQLMNDLSDMYSNPEGADMIKHPTVGLYCAAKSEDD
AFYRATVSGITGHQCEVFFVDYGNTEIVECGNLRVLPDCLKELPPLALKCSLAGIRPKDQ
KWSQDASDFFTTVVVDKIVDIHITAKWDGGYVVNLTNSSSDGESDLSKLMCTAGYAVQDE
KTTSKVVSGPTALPTALNPGDIPYDAYKTSFTALSTEDSTGKESRTAFKEHLFPIGSSFE
VNVSFIESPNDFWCQLTKNMGHLKLLMQDIQNFYTDSQFLPPVETACVARHPGNGMWYRA
LVIQKHATPHVDVLFIDYGQTKTVSIQDLRNINPSFLKLRGQAFRCSLYNLIHPTSHNTV
EWTEDAIAQFQDFVDTAADNHVALKCTIYAVMFDAQKVVFNVVDLETPFVSVCSLMVQKG
LANRAPSKKAPPSPFRLDTYYYSTHGIKTGTEELVTVTSVKSVNHFYCQLKRNATIIEGL
AESVNTMCHQLESSNCPQTFGTVCFAKYTDGQWYRGQIKATQPTVLVHFVDYGDTIKVDK
SNLLPIPIEASEIMSVPVQAVECGLSDIQGEVSDEVNSWFETHMTDCTCRALVVAKEPSG
KLLVELYDGKTQVNAKTKEKLRIKEHRIENQGHNEKVTNQCCAPKAAGPAEEIPKKRRIP
YQAPYTTPHQRQTTVRNGNVRNGAELREVGVIEMKTVPQIETKRFPTPKSPLSPAQQTNY
VAPKAKVQTLPKLSDLPSKCIEAGLETDVFISHCNSPWSFFVQLTKEEDDIFSFVEKLNE
EQQMTETVDVRDLHQGDLVKAVFPDDSSWYRAVVQEVSRSGTASVEFIDFGNTATTLVSK
MCRLDTCSIECPRFSIHCLLSGTPAQDEKDELNQEILSKFKEEIGAGGDKELKCKFVKQS
GSVWEVSLWDSGRQVTCGIPLKHPGTLSDATPESSMGPSQVKENPPKSCSVQELAPEKFP
LNNNESVCFCKADIAVGQTMEAYVSTIIGPQSFWCQSANSDELDKITKMVSEAGSEVQCK
PVEIDTLSTGSPCIAIFTDDEQLYRAEVRSIEGDYLSILFIDYGNESRVNIKDVRALPPL
LLNIPPQAFLCQLEGFDASQGTWDDKAADQLSELITDKPLHLTFLTVSSDEAGRTTCFVH
VELEGQVVNEVMKAYWKSYTVDEPDSTGESTPCANPSLPCESVQIGEQTAVMDPCPQEPS
KTTTKQTFDTLVPSTVQEELDDGFHEGHKDCPTIFPGTSQKHADEDPYLKSTLENTDFDI
GQKDETESTTDLLDKDREPTEKEEFEVLQTVEERTDLPAALSNMVEDDTKTVTVIEICKE
QLNEAEQTDCLSDSCVSSGDKLTLALVANQNVLKEDCVDQDRLQVLLLDQASSVVDSESA
RLLEEVPKETTLPHGDQSQDNMYTDVFKLHVENTLESPEPSHTAPEDLKSKDKDSCVTSE
ELKNLRKELESIDLNEESISDTVLETGWVNCLSEFGRLQRAGENIAVGSNYVIWSIARKT
WCKVKVLKVFEDSVKVLLVEHDSEMVVDPQNILCTSSESEQSEPDESEHQFDTASSNEGS
QYYLDEDTDDSDNTISGDDPNNTTSEKLAVLDEVVGPDQAVEVPPEDPDQLCSVRDIFDL
SPSAPLEDCCEERVESSDATTADALSCIPAQDKLRVDVKEVQLSSEPNTENPMRRVTKQH
EVDFSISAYDTPVSETEAAVSETKAAVSADVENESRVIIQEDKDVLVSEASCPEQCRYEF
EEGTEAEVVASAVSQDGDIVVADYVKASNLDAFEHQMNSVTHLTLKVEDCSDEDSVIFVS
ETLPANQQLRD
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcaattcctgaactcccaacacctggttcaaatgtatcagttctcatcaagaga
gtgaatttgaatcctctctgtgttctcgtagagttttggtgtaactttgatcaagagagg
aaaatcgcccatcaatgtttacgaaaagacattcagtgtcccagagaagcctttcgggag
ctggagggaaatccaggggaccagtgcttggtcagtgtatttgaaacatggtaccgggca
cgcatagtatccaaaaatggctccaactacaatgtgtttctcattgatgagggcagaagc
ttaagtgccaccactggcatgttggcatggggtcacagtgagttctttcgtctaccacca
gaggtcgaattctgtgttctctccaacgtgttaccgctgtctacagaaaacaggtggtct
ccagtggcattggagttcctgaaatctctctgtggacaacaagccactgcttctatccaa
gatgtcctggtgccccacagaaccttcctcctggatatccccagcatatccaggcagatg
tacgaaatgggattcgccaagaagcttccaactgaaagattcaggctttttgtttcaagg
tcattgcaggcacacagtggagcagctacgtcaaacaaacctcagcagatgtcaatgaaa
aatgatccgctggaccgacacgaactgatggaaaagcaacaacagtacatgtatcctgag
cttcaaacggaaaccgtggagaccgttatcatcaccgaagtcacaaaccccctgcgtctt
ttctgtcagcttaaggtcttctcgcaagagctgaggaagctaacagagcagatcacccag
tactacgagggccgagttcaaacaggcctcagcagacctcaaacccttggctccccatgt
gcctcacgaggaagtgacgggaagtggtacaggtcggttctacagcagctcttcccagcc
aacagtgtagtggaggtactgcaggtggataacgggaagaaacagtttgttcaaatggaa
aacattcgattcctggctgcagagtttttcaggatgcctgttgtgacatacgtctgttcc
ctccatggcattattgacaaaggagtcggatggacagtccctcagatcgattatcttaaa
acccttctcctgaacaggactgtgattgccaaatttgagtaccagagtctctctgagggc
gtgcactatgtgacactctacggagatgaaaacatgtgcatcaacacaatgtttggctct
aaggagaaatgtattcttgagtgtgacggatctcatggagattatgctgtgtgtagcaaa
cttgcaccaaaacctaaacacctcggtggaatggaaactcgagtaagtcctcccagtggc
gatgccactgaaacacgggtgaagttcacagcagaagatctccagctccagtcctcccat
gtggcagtggtgcagcatgtgagcaacccatcagagttctggattcaaacacagaggtat
gctgtcgagtttgatcagctgatgaatgacttgtctgacatgtacagcaacccagagggt
gcagacatgatcaaacatccaacagtcggtctttattgtgccgccaagtctgaagatgat
gctttttacagagcaactgtgtctggcatcactggccaccagtgtgaggtattttttgtt
gactatggaaacacagagattgttgagtgtggcaatctccgggtgcttccggactgtttg
aaagagttacctccgctcgccttgaaatgtagcctagcaggcatcagaccaaaagatcaa
aaatggagtcaagatgcctctgactttttcacaacagtagtggtagacaagattgttgac
atccatataactgccaaatgggatggcggttatgttgttaatcttacaaattcatcaagt
gatggagagagcgatctcagcaagctgatgtgcacagctggatatgcagtacaggatgag
aaaacaacatcaaaagttgtcagtgggcctaccgctctccccacggcactgaacccagga
gacattccatatgatgcatacaagacaagtttcacagctttatccactgaggattcaact
ggaaaagaaagcagaactgccttcaaggagcatttattcccaataggaagctcatttgaa
gtcaacgtgtccttcattgaaagtccaaatgacttttggtgtcaactgacaaagaatatg
ggccaccttaaactgctcatgcaagacatccaaaacttctacacagacagccagtttctg
ccccctgtggagacggcttgtgtcgcccgtcacccaggcaatggaatgtggtacagggcc
ttggtcatccaaaagcatgctacacctcatgtcgatgtactgtttatagactatggtcaa
actaagactgtctccattcaagacttgagaaatataaacccttccttcctgaaactccga
ggtcaagctttccgatgcagcctgtacaacctcattcaccccacttcccataatactgtc
gaatggaccgaagatgccatcgcccagtttcaggactttgttgatactgcagcagacaac
cacgtggcactgaagtgcaccatctatgcagtcatgtttgatgcccaaaaagtggtcttt
aacgtggtggatctggaaacaccctttgtgagtgtctgcagcctaatggttcagaaagga
cttgccaaccgtgctccgtctaagaaagcacctccttcccctttcaggttggacacgtac
tactactccacccacggcatcaaaacaggaacggaggagttggtgacagtgactagtgtg
aaaagtgttaatcacttctactgccagctaaaaaggaatgccacaatcatcgaaggactg
gcggagagtgtcaataccatgtgtcatcagctggagagttcaaactgcccccaaacattc
ggaacagtttgctttgccaagtatacagatggacaatggtacagaggacagatcaaggct
acacagcccactgtccttgttcactttgtggattacggagacaccattaaagtggacaaa
tcgaacttgcttccgatccctattgaagctagtgagatcatgtccgtccctgtgcaagct
gtggaatgtgggctgtcggatatccaaggtgaggtttccgatgaggtcaacagctggttt
gaaactcacatgacagactgtacatgcagggctcttgtggtggcaaaagagccaagtgga
aaactgcttgttgagctttatgatgggaaaacacaagttaatgccaagactaaggagaaa
cttcgcatcaaagagcacaggattgaaaaccagggacacaatgaaaaggtcaccaaccag
tgttgtgctcctaaagcagctggaccagcagaagaaatccctaaaaagagaaggattccc
tatcaagcaccctacacaacaccacatcagaggcagacgactgtcaggaatgggaatgtc
cgaaatggtgcagagctaagagaagtcggtgtcattgagatgaaaaccgttccccagatc
gagacaaagcgtttcccaactcccaagtcacctctcagcccagctcaacagactaactat
gtagcgccaaaagccaaagtgcaaactctaccaaagttatcagacttgccctcaaaatgc
atcgaggctggtttggagacagatgtctttatttcgcactgcaacagcccgtggagcttc
tttgtacagttgaccaaggaggaagatgacatattttcctttgtagaaaaactcaatgaa
gaacaacagatgactgagactgtagatgtcagagacttgcatcaaggtgacttggtcaaa
gcagtgtttccagatgattcctcatggtaccgtgcggtggtacaggaggtatcaaggagt
gggacagcttctgtggagttcatagacttcgggaacacagccactactttagtctccaag
atgtgtagactagacacatgttccatagaatgtcccaggtttagcattcactgcctgcta
agtggaacaccagctcaggatgaaaaagatgaactgaaccaagaaatcttgtccaaattc
aaagaagaaattggagcaggcggtgataaagagctgaaatgcaagtttgtgaaacagtct
ggatctgtgtgggaagtcagcctttgggacagtggcagacaggtcacatgtggcatccct
cttaaacatccaggaaccttatctgatgcgacaccagagagctccatgggacccagtcaa
gtaaaagaaaatcccccaaaaagctgttctgtacaagagttggcaccagagaaattccca
ttgaacaacaatgaatctgtgtgtttttgcaaagcagacattgcagttggacagaccatg
gaagcctatgtctcaaccatcattggccctcagtctttctggtgtcagtcggctaattca
gatgaacttgacaagatcacaaaaatggtcagtgaagctggcagtgaggtgcagtgcaaa
ccagttgagattgacaccctttccactggaagtccatgcattgctatttttacagatgac
gagcagttgtatcgtgcagaagtcagaagcatagaaggagattacctgtccattctcttt
attgattatggaaatgagtcccgagttaacataaaagatgtacgagcattgcctcctctg
ctgttaaacattcctccacaagctttcctctgccagctcgaagggtttgatgcatctcaa
ggcacctgggatgacaaggcagcagaccagttgtcagagctgataacggacaagcctctt
cacctgacttttttgacagtgtccagtgatgaagcgggccggactacatgttttgtccac
gtggaacttgaaggccaagtggtaaatgaggtgatgaaggcttactggaagagctataca
gtggacgaaccagatagcactggcgagtcaactccatgtgccaatccatcattgccatgt
gaatcagtgcagattggggaacaaacagctgtgatggatccctgtccacaagaaccatct
aaaaccaccacaaaacaaacatttgacactttagttccaagtacagttcaagaagaactt
gacgatgggttccatgagggccacaaggattgtccaacaatctttccaggtacaagtcag
aagcatgctgacgaggacccatacttgaagagcacacttgaaaatacagattttgacatt
ggccagaaagatgagactgagtcaaccacagacctcctggataaagacagagaaccaact
gagaaggaggagtttgaagtactgcagacagttgaagagaggacagatttgcctgcagcg
ttatccaacatggtggaagatgatacaaagacggtaaccgtgattgagatatgtaaagag
caactcaatgaagcagaacagacggattgtttgtcagacagttgtgtttccagtggtgat
aaacttacactggccttggttgccaaccagaacgtgctcaaagaagactgtgtggatcaa
gataggttgcaggttttattgttggaccaagcctcaagtgtggttgactcagaatctgcc
cggttattagaagaggtccctaaagagacaactttgccacatggtgaccagagccaagat
aatatgtacacagacgtcttcaaactgcatgtagagaacaccttggagagcccagagccc
agtcacactgccccagaggatcttaaaagcaaagataaggactcttgcgtcacatctgaa
gagctcaaaaatctgcgcaaagaacttgagtccatagacctgaatgaagagagcatctct
gacactgttcttgagactggttgggtcaattgtctttcagagtttggtcgacttcagagg
gccggggagaacattgctgttggatccaattatgtaatctggtccatagccaggaagacc
tggtgcaaagtaaaggttttgaaagtctttgaagactcagtcaaggttcttctggttgag
catgattctgaaatggtggtagatccacagaatatcttatgcacgtcttcagagtctgag
caaagtgaaccggacgagagtgaacatcagtttgacactgcctcgtcaaatgaagggtcc
cagtattacttggatgaggatactgacgacagcgacaacacaatctcaggagatgacccc
aacaatacaacttcagagaaattggctgttttggatgaggtggttggtccagaccaagcg
gttgaggtgccacctgaagacccagatcaactgtgcagtgtccgggacattttcgatctc
tctccttcggcaccattggaggactgttgtgaggagagagttgagagttcagatgcgacc
acagcggatgccctatcctgtatccctgcacaggacaagttgagggtggatgtaaaagag
gtgcagctttcttctgaaccaaatacagagaatccaatgcgaagagtaacaaaacaacat
gaagttgacttttcaatatcagcttacgatacacccgtgtccgagacggaagcggctgtg
tccgagacgaaagcggctgtgtccgctgatgtggagaacgagtccagggttatcatccaa
gaagacaaggatgtccttgtttcagaagcctcttgtcctgaacaatgtagatacgagttt
gaagaagggaccgaggcagaagttgtggccagtgctgtctcacaggatggggatattgtg
gtagctgattatgtgaaggcttccaatcttgatgcttttgagcatcagatgaactctgtg
acccacctcaccttgaaagttgaggactgctctgacgaggacagtgttatctttgtgagt
gagactctccctgccaatcagcagttgagggactaa
DBGET
integrated database retrieval system
