Osmerus eperlanus (European smelt): 134024482
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Entry
134024482 CDS
T10927
Symbol
lrfn2b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134024482 (lrfn2b)
04990 Domain-containing proteins not elsewhere classified [BR:
oep04990
]
134024482 (lrfn2b)
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
SALM family
134024482 (lrfn2b)
Domain-containing proteins not elsewhere classified [BR:
oep04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
134024482 (lrfn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_1
Ig_2
fn3
LRR_5
LRR_9
LRR_LRWD1
LRRCT
GP79
DUF6479
SAP130_C
Sp38
Motif
Other DBs
NCBI-GeneID:
134024482
NCBI-ProteinID:
XP_062322913
LinkDB
All DBs
Position
8:complement(6363202..6381064)
Genome browser
AA seq
777 aa
AA seq
DB search
MDHILCCLLVLGIAVMRAHACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRGTVELRLG
GNYIIRITQQDFANMTDLVDLTLSRNTISYIQPFSFGDLETLRSLHLDNNRLMELGPDDL
RGLVNLQHLIVNNNQLGRVSDRTFEDLAPSLEDLDLSYNNLRSLPWESVRQMVNLHQLSL
DHNLLDFIPEGTFTDLERLARLDLTSNRLQKLPPDPIFARAQDSVLMTTPYAPQLSLSLG
GNPLHCNCEVLWLRRLERDDDLETCASPPSLKGRYFWYVREEEFVCEPPLITQHTHRMLV
LEGQTASLRCEAIGDPIPTIHWISPDDRLLGNSSRTEVYKNGTLSILITTSKDYGTFTCI
AANVAGESTASVEVSIIQLPHLSNGTGQPSQPKSRLSDITGTTRVSKPAKSQPERVVSAS
EVTAVSALVRWSVSKSAPKVKMYQLQYNCSDDEVLIYRMIPASSKAFLVTNLVSGTRYDL
CVLAAWDDTATTLTATNVVGCTEFFTQDDYPQCQSLPSQLLGGTMILVVGGIIVATLLVF
IVILMVRYKAGDSEPPPSKLTSVSDTHSQTNGGRLGQNGVPLPLPKPKAKVTLQDEVVEF
KCGSLQSSLTSSSSSGSLAGDSYSPNTTLANMWRSAAPSNPRANLDHLLGAFTSLELRGT
QGKDLGASGSPALEANRPPTDKEPLLGRTMDSRLSRLLMLPLDSRPKRSQSFDMGDATSS
STAVTAPVSSYPRRISSIWTKRSLSVNGMLLQCDEEGDSESSKGTVDSSEWVMESTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatcctctgttgcttgctggtcctgggaatcgcagtgatgagggcccatgca
tgtcccaagtactgtgtctgccagaacctgtcagagtctctagggaccctgtgtccctcc
aaaggccttttgttcgtgcctccggatatcgaccgtggcaccgtggagctccgcctgggg
gggaactacatcatccgaatcacccagcaggactttgccaacatgacggacctggtggat
ttgaccttgtcccgaaacaccatcagctacatccaacccttctcctttggagacctagag
acactgcgctcgctccacctggacaataacaggttaatggagctgggcccagatgacctg
cggggtctggtcaacctgcagcacctcatcgtcaacaacaaccagctgggccgcgtctct
gaccggacattcgaggacctggccccttccttggaggacctagatctgtcctacaacaac
ctgaggtccctgccctgggaatcggtgcgccagatggtcaacctgcaccagctcagtctg
gaccacaacctgctggacttcatcccagaggggaccttcactgacctggaaaggctggct
cgcctggacctcacctccaaccggctccagaagttacccccggaccccatctttgcccgg
gcccaggactcagttctcatgaccactccgtatgccccccaactgtccctcagcctgggg
gggaaccccctgcactgtaactgtgaggtgctgtggctgcggagactggagcgagatgac
gacttggagacctgcgcttcccctcccagcctgaaggggcgctacttctggtacgtgagg
gaggaggagtttgtgtgcgagccacctctcatcacccagcacacccacagaatgctggtt
ctggagggccagacagccagcctgagatgcgaggccattggagatcccatccccaccatc
cactggatctccccagacgaccggttgcttggcaactcttcccgtacggaggtgtataaa
aacggaaccctgagcatcctgattaccacatccaaggactacggcaccttcacctgcatt
gccgccaatgtcgctggggaatcaactgcttcagtggaggtgtcaatcatccagcttccc
cacctcagcaatgggaccggccagccctcgcagccaaagtctcgcctttcggacatcacc
ggaaccaccagggtcagcaagcctgccaagagccagccggagagagtcgtgtccgcgtct
gaggtgacggctgtctcagccctggtcaggtggtcagtgagcaaatcggcccccaaagta
aagatgtaccagctccagtacaactgctccgatgacgaagtcctcatctacaggatgatc
ccggcttccagcaaagcctttctggtaacaaacctagtctcagggacccgctacgacctg
tgtgttctggctgcctgggatgacacggccaccacgctgactgccaccaacgtggttggc
tgcaccgagttcttcacccaggatgactacccccagtgccagtccctgcccagccagctc
ctggggggaaccatgatcctggtggtggggggtatcattgtagccaccctgttggtcttc
attgtcatcttgatggttcgttacaaggcaggggacagcgagccacctccaagcaagctg
acaagtgtcagcgacacacactcccagactaacggtggccggctggggcagaacggagta
cccctgcccttgcccaaacccaaggccaaagtgacactacaggacgaggtggtggagttc
aagtgtggctccctccagagcagcctcacctcctcctcctcgtcaggctcgctagctggg
gactcttacagccccaacaccaccctggctaacatgtggaggtcagcagccccctccaac
cccagggccaacctggaccaccttctgggggccttcacctctctagagttgcgagggact
cagggcaaggacctaggggcctccggcagcccagcactggaggccaataggccccccaca
gacaaggagcccttgctgggccggacaatggactcccggctgagccggctcctaatgctg
cccctggactccaggccgaagaggagccagtcttttgatatgggggatgcaacgagttcc
tcaactgctgtcacggcgccagtgagtagctacccacgcaggatcagcagcatctggact
aagaggagcctgtctgtcaatggcatgcttctgcagtgtgacgaggagggagacagcgaa
agtagcaaagggaccgtggacagttccgagtgggtcatggagagtactgtctag
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