Osmerus eperlanus (European smelt): 134024494
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Entry
134024494 CDS
T10927
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03040
Spliceosome
oep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134024494 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134024494 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134024494 (srsf5b)
Spliceosome [BR:
oep03041
]
Common components
Common spliceosomal components
SR proteins
134024494 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
134024494
NCBI-ProteinID:
XP_062322929
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All DBs
Position
8:complement(4789674..4794279)
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AA seq
293 aa
AA seq
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MSGCRIFIGRLNPSAREKDVERFFKGFGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGAGGGGGRFPDRYGRGSQESRSRNPPPMRTENRLIVEN
LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKEINGRKI
KLIEAAKKRSRSRSRSESSSRSRSRSRGRSPSRSRTPRRSRSRSPKTYNRSRSRSHSRST
SRPPRGSPPVQRTKEPAKRSSKASKSASPPPVQRAASSRSRSRSRSLSTDSRH
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgtcgcatattcattggccgactgaatccttcggcaagggaaaaagatgtg
gagagattcttcaaaggtttcggtcgcatcagagatatagacctgaaaagaggctttgga
tttgtggagttcgacgatcccagagatgccgaagatgcggtttatgagttggacggcaaa
gaactatgcaacgagagggtgaccattgagcatgcccgcgtgcgactgcgagggggcaga
ggccgtggggctggaggaggtggaggtcgtttccccgaccgctatggcagaggctctcag
gagagtaggagtagaaaccctcctccaatgcgcaccgagaatcgactgattgtggagaat
ttgtcatctcgtgtcagctggcaggatctgaaagatttcatgagacaggcaggagaggtt
acgttcgctgacgcccaccgacccaagctcaacgaaggggtggttgagtttgcttcctac
agcgatctgaaaaacgcccttgagaaactgtctgggaaggaaatcaatggcaggaaaatc
aagcttattgaagctgctaagaagaggtccaggagccgttcccgttccgagagctcctcc
cgctcgcgctcccgttctcgcggccgctccccttcccgctctcgcacccccaggaggtcc
cgctcacgcagccccaagacctacaaccgctcacggtctcgctcccactctcgcagcacc
tcccgccccccccgtggctcccccccagtccagaggaccaaggagcctgccaagcgctcc
tccaaggccagcaagtctgcctccccaccccccgtccagagagcggcgtcctccaggtcc
cgatctcgctcccgttccctgtccacggacagccgccattag
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