Osmerus eperlanus (European smelt): 134024559
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Entry
134024559 CDS
T10927
Symbol
chrna2b
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2 isoform X1
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134024559 (chrna2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134024559 (chrna2b)
Ion channels [BR:
oep04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
134024559 (chrna2b)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
134024559
NCBI-ProteinID:
XP_062323049
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Position
8:8502554..8511213
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AA seq
633 aa
AA seq
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MIRENIKSGCVKLSSCLFCEDDDTRDYIQSVQSDRNIFTRHGFKITFQVDDPMPSNNILF
CCFAWNNMERGINHLFSVRTTIVWCFFLCESIFCHEKTHSHAEDELFKKLFVRYNKWSRP
VPNISDVVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWRPSDYDNVTSIRVP
SELIWVPDIVLYNNADGEFAVTHMTKAHLFYNGRVLWVPPAIYKSSCSIDVTFFPFDQQN
CKMKFGSWTYDKAKIDLEKIEDTVDLNNYWESGEWAIINAVGRYNTKKYDCCHEIYPDIT
YFFIIRRLPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITE
IIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHQMPSWVHTVFLDLIPR
WLFMRRPAPDGRRRRLLLLQQGETVARQQGRSLATHRHAGPCLSTSASWLQDGDMAGEPQ
RPRYEDLELGTLSSYFSFRPPSPRPPGSTPPPQPKHAAPQGRPEAGGVGGGGVANRKVAV
GGGGRGNVVRRATKVDKMVSDVAFPLSPSVLRALEGVHYIADHLRAEDADFSVKEDWKYV
AMVIDRIFLWMFIIVCLLGTIGLFLPPWLAGMI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagagaatatcaaatctggttgtgtcaaactgtcctcatgccttttctgcgaa
gatgatgacacaagagactacattcaaagcgttcaaagcgaccgcaatattttcacccgt
cacggtttcaagataacctttcaagtggacgacccaatgccctcaaataatatacttttt
tgctgttttgcctggaacaatatggaacgcggaatcaaccacctgttttcagtgaggaca
accattgtctggtgcttcttcttatgtgagtcaatcttctgccatgagaagactcactcc
catgctgaggatgagcttttcaagaagctctttgtccgttacaacaagtggtccaggcct
gtgccaaacatctctgacgtggtcatcgtcaagtttggcctctccatcgcacaactgatt
gatgtggatgagaaaaaccagatgatgacaaccaatgtctggctgaaacaggagtggaat
gactacaagcttcgctggaggccctcagattatgacaatgtgacgtctattagagttccg
tctgaactcatctgggttcctgacattgttctctacaacaatgccgatggtgagtttgca
gtgacccacatgactaaggctcatctcttctataacggcagagtcctctgggttccaccg
gccatctacaagtcctcctgctccatcgacgtcaccttcttccctttcgaccagcaaaac
tgcaagatgaagttcggttcatggacctacgacaaggctaagattgacctggagaagatc
gaggacacggtggacctcaataactactgggagagtggcgagtgggccatcatcaacgcc
gtgggaaggtacaacaccaagaagtacgactgctgccacgagatctacccggacatcacc
tacttcttcatcatcaggagactgcctctgttctacaccatcaacctcatcatcccctgc
cttctcatctcctgcctcactgtgctggtcttctacctaccctccgactgtggggagaag
atcacgctgtgcatctccgtcctcctctccctcaccgtgttcctcctcctcatcaccgag
atcatcccgtccacctcgctggtcatccccctcatcggggagtacctcctcttcaccatg
atcttcgtcaccctcagcatcgtcatcaccgtcttcgtcctcaacgtgcaccaccgctct
ccgagcacacaccagatgccgtcttgggtccacaccgtgttcctggacctcatccctcgc
tggctcttcatgaggaggccggcgccggacggccggcgccgcaggttgctgctcctccag
cagggggagacggtggccaggcagcagggccggagcctcgccacgcacaggcatgcgggc
ccctgtctgagcacctcggccagctggttgcaggacggcgacatggcgggcgagccccag
aggcctcgctacgaggacctggagctggggacgctgtcctcttacttctccttccgcccg
ccgtcgcccaggccccctggctccacccccccgccgcagcccaaacacgccgcgcctcag
ggccgtccggaagcaggaggggtcggaggcggcggagtggccaataggaaggtggcggtt
ggaggaggtggcagggggaatgtggtccggcgggcgaccaaggtggataagatggtttcg
gatgtggcgttccctctctctcccagtgtgctgcgggcgctggagggggtccactacatc
gccgaccacctgagagcagaggacgctgacttcagtgtgaaggaggactggaagtatgtt
gccatggtgatagaccgcatcttcctgtggatgtttatcatcgtgtgtctgctgggaacc
atcggcctgttcctgcccccctggctggccggcatgatatag
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