Osmerus eperlanus (European smelt): 134024608
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Entry
134024608 CDS
T10927
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134024608 (ddx1)
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134024608 (ddx1)
Transfer RNA biogenesis [BR:
oep03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
134024608 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134024608
NCBI-ProteinID:
XP_062323150
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Position
8:complement(9745850..9752510)
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AA seq
741 aa
AA seq
DB search
MAAFGEMGVMPEIAQAVEDLGWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQVVYETLKDQQEGKKGRTAVKAGGTVLNTWQMNPYDRSPAFAIGPDGLCCQSREFKEWH
GCRSTKGVTKGKHYYEVSCHDQGLCRVGWSTSPASLDLGTDKYSFGFGGTGKKSHNKQFD
SYGDEFTMHDTIGCYLDLDNGHLSFSKNGTDLGLAFEIPPHLSNQPFFASCVLKNAELKF
NFGGEEFKNAPKAGFGALDKADEKHVVKSTQSGSAKVSQVKAVSTAPKALIIEPSKELAE
QTLNVVNQFKKNVDNPKLRDLLIIGGVAAKDQLAILDQGVDIVVGTPGRLDDLISTGKLV
LSQVRFLVLDECDGLLSAGYTDFIMRVYNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPETVHHVVVPVNPKQDRLWERLAKNHIQTDEVHAKDNTRPGAN
TPEMWSEGIKILKGEYTIRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDKKGHQL
SCVCLHGDRKPQDRKHNLEVFKKQEVKFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHTCANRGRGCHNTRLKEDGGCTIWYNEIELLS
DVEEHLKCTITQCEPDIKVPLDDFDGKVTYGQRRATGGGGHYKGHVDVLAPTVQELANLE
REAQTSFLNLGYLPNQIFKAF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatttggtgaaatgggtgttatgcctgaaattgctcaggctgtcgaggacttg
ggctggctgcttcccactgacatccaggcagagtctattccattgattctcggaggtgga
gatgtcctcatggctgcagagactggaagcggtaagactggggccttcagtatcccagtg
atccaggtagtgtatgagactctgaaggaccagcaggagggcaagaagggcagaactgct
gtgaaggcaggtggaacagtcctcaacacctggcagatgaatccgtatgatcgtagccca
gcgtttgctatcggcccagatggtctgtgttgtcaaagcagggagttcaaagagtggcac
gggtgtcgctccaccaaaggtgtcaccaaggggaagcactactacgaggtgtcatgtcat
gatcagggcctgtgtcgagtgggctggtccaccagcccggcctctctggacctggggact
gacaagtacagctttgggtttggagggactgggaagaaatcccacaacaagcagtttgac
agttatggagatgagttcacgatgcatgacaccatcggatgctacctggatcttgacaac
ggtcatttgtcattctccaaaaatggtactgatctgggattggcctttgagatcccccct
cacctgagcaaccagccgttctttgcctcctgtgtactcaagaatgcagagctgaagttt
aactttggcggagaggagtttaaaaacgcccctaaggctgggtttggagcactggacaaa
gcagacgagaaacatgtggtcaagtccactcagtctggcagtgccaaggtgagtcaggtg
aaggccgtgtccaccgcccccaaagccctcatcatcgagccctccaaagagctggctgag
cagacgctcaacgtggtcaaccagttcaagaagaatgtggacaaccccaagctcagagat
ctcctgatcatcggtggcgtagcggccaaagaccagctggccatcctggaccagggggtg
gacatcgtggtgggaactccagggcggctcgatgacctcatctccacagggaagctcgtc
ctgtcccaagtccgcttcctcgtcctggatgagtgtgatgggctactctctgcaggctac
acagacttcatcatgagggtctacaaccagatcccacaagtcacctcggacggcaagagg
ctgcaggtcatcgtgtgttccgccaccctgcactcgttcgacgtgaagaagctgtcggag
cgcatcatgcacttccccacctgggtggacctgaagggagaggactccgtccccgagacg
gtccaccacgtggtcgtccccgtcaaccccaagcaggaccgcctctgggagaggctggcc
aagaaccacatccagacggacgaggtccacgccaaagataacaccagaccaggagccaac
accccagagatgtggtcggaaggcataaagattctgaagggagagtatacgatcagagcc
atcaaggaacacaaaatggaccaggctatcatcttctgtaggaccaagattgactgtgac
aacatggagcagtacttcatacagcaggggggaggtcccgataaaaaaggacaccagtta
tcctgcgtctgtctccacggcgacagaaagcctcaagatcgcaaacacaacttggaggtg
ttcaagaaacaggaagtgaagttcttgatctgcactgacgtggctgccaggggcattgac
atccggggagttccctacgtgatcaacgtgaccctgccagacgagaagcagaactacgtc
catcgtatcggccgagtgggcagagctgagagaatgggattggccatttctttggttgct
atggagaaagagaaggtgtggtaccacacgtgtgctaaccggggccgaggctgccacaac
accaggctaaaggaagatggaggctgtaccatctggtacaacgagatagagcttctgtca
gacgtggaggagcacctgaagtgcaccatcacccagtgtgaaccggacatcaaagtgcca
ttggatgacttcgacgggaaggtcacttatggacagcgtcgggcaacaggaggaggtggt
cactacaagggtcacgtggatgtgttggcccccactgtacaggagctggccaacctggag
agagaggcccagacctccttccttaacctgggctacctccccaaccagatattcaaggcc
ttctga
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