Osmerus eperlanus (European smelt): 134025054 Help Entry 134025054         CDS       T10927                                  Symbol fdft1 Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism oep  Osmerus eperlanus (European smelt) Pathway oep00100   Steroid biosynthesis oep01100   Metabolic pathways Module oep_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:oep00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     134025054 (fdft1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:oep01006]     134025054 (fdft1) Enzymes [BR:oep01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      134025054 (fdft1) Prenyltransferases [BR:oep01006]  Terpene biosynthesis   Squalene/phytoene synthase    134025054 (fdft1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Motif Other DBs NCBI-GeneID:  134025054 NCBI-ProteinID:  XP_062323836 LinkDB All DBs Position 8:complement(8642340..8648558) Genome browser AA seq 459 aa AA seqDB search MAGACCKCLVTLSVFKRSLTVTPRSPGPALRSIFSGGRRDRGMQEGCWAARPILLRTAAS YRQPMFLCFSCQDSMRDSLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDT VEDDMSIPLEKKVPMLNDFHTYLYQAEWCFKESQEKDRQVLDDFPTISLEFRNLGQEYRD VISDICHRMGVGMAEFLEKKVGSMKEWDQYCHYVAGLVGIGLSQLFSASQLEDPEVGGDT ELANSMGLFLQKTNIIRDYLEDTQEGRHFWPQEAWSQFSSHLEDLAQPDKLHSALSCLNL LVTDALRHVPDVIAYLGRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQA VTLMMQATSMATVQSIIAQYSQEILQKVSLSDPSRDQTLRILTGIQEKSSLSQSSLPSRT HHLSPMYLSAAMLLAALSWQYLSTVAAAQAPGTSDMKGN NT seq 1380 nt NT seq  +upstreamnt  +downstreamnt atggccggagcttgttgtaagtgtctggtcaccctctcggtgttcaaacgctcgttaact gtcacgccgcggagccctggacccgccttacggtcaatcttctccgggggaaggcgcgac cgtggcatgcaggaaggatgttgggccgcccggccgatcctgttgagaaccgcagcttct tacagacaacccatgtttctctgtttctcatgccaggactccatgagggacagtctgcgg acatgctacctctatctaaatcagaccagtcgaagtttcgccgctgttatccaagcacta gacggagagttacgacatgcggtgtgtatcttctacctggtcctgcgtgccttggacact gtagaagatgacatgagcatccctctggagaagaaggtgccaatgctcaacgacttccac acctacctctaccaggctgagtggtgcttcaaggagagccaggagaaggacaggcaggtc ctggacgacttcccaacgatttctctggagttccggaacctgggtcaggagtacagggac gtcatctcagacatctgccaccgcatgggggtggggatggccgagttcctggagaagaaa gtaggctccatgaaggagtgggatcagtactgccactatgtggcggggctggtggggatc ggcctgtcccagctgttctcagcctctcagctggaagaccctgaggtgggcggcgacaca gagctggccaactccatgggcctgttcctccagaagaccaacatcatcagagactacctg gaggacacacaggagggacggcatttctggccacaagaggcatggagccagttctcctct cacctggaggacttggcccagcctgacaagctgcactccgccctgtcctgcctcaacctc ctggtgactgacgccctccgccacgtccccgacgtcatcgcctacctcggccgtctgcgc aaccagagcgtcttcaacttctgcgccataccacaggtgatggcgatagcgaccctctct gcatgttacaacaaccctcaggtgttccagggtgtggtgaagatcaggaagggacaagct gttacactgatgatgcaggcaaccagtatggccaccgtgcagagcatcatagcccaatac agccaagagatcctccagaaggtgtccttgtctgacccctccagagaccagactctgcgt atcctgactgggattcaggagaagtcctccttgtcccagtccagtctcccgtcccgcacc caccacctctctcccatgtacctctctgctgccatgctcctcgccgcactcagctggcag tacctcagtactgtagctgctgcgcaggctccgggaacctccgacatgaagggaaactga

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