KEGG   Osmerus eperlanus (European smelt): 134025131
Entry
134025131         CDS       T10927                                 
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03082  ATP-dependent chromatin remodeling
oep03083  Polycomb repressive complex
oep04110  Cell cycle
oep04330  Notch signaling pathway
oep04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:oep00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    134025131
   03083 Polycomb repressive complex
    134025131
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    134025131
   04350 TGF-beta signaling pathway
    134025131
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    134025131
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oep03036]
    134025131
Enzymes [BR:oep01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     134025131
Chromosome and associated proteins [BR:oep03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     134025131
   HDAC complexes
    Sin3A-HDAC complex
     134025131
    BRAF-HDAC complex
     134025131
    REST complex
     134025131
    SHIP complex
     134025131
    MiDAC complex
     134025131
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     134025131
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    134025131
  Chromatin remodeling factors
   NuRD complex
    134025131
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 134025131
NCBI-ProteinID: XP_062323998
LinkDB
Position
8:2379534..2384975
AA seq 488 aa
MAYTVAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIEDESYE
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTEIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTMEY
MEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPDDTVDEDTDDPDKRMSIRASDKRIACDE
EFSDSEDEGEGGRRNVASNKKAKRSRVEEDKKEGEEKKVEVKEEEKDKESSTGKIDTKSV
KTEQTSST
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacacagttgcaggtggaaccaagaaaaaagtttgctactactatgacggagac
attggaaattattactacgggcaggggcaccccatgaaaccgcacagaatccgtatgacc
cataacctgcttctgaactatggactctacagaaaaatggaaatatatagaccccacaaa
gccactgcagaggagatgactaaatatcacagcgacgattacatcaaattcctccgatcg
attcgaccggataacatgtcagagttcagcaagcaaatgcagagattcaatgttggagag
gactgtcctgttttcgacggcttattcgagttctgccagttgtccgctggtggatctgca
gctggctctgtgaagctcaacaggcagcagacggacatcgcggtgaactgggctggagga
cttcaccacgccaagaagtccgaggcgtctgggttctgctacgtcaacgacatcgtcctg
gctatcctggagctgctaaagtaccaccagagggtgctgtacattgacattgacattcac
catggcgacggggtagaggaggccttctacaccacagacagagtcatgaccgtgtccttc
cacaagtacggagagtacttccccgggaccggagacctccgagatattggtgctggaaaa
ggcaaatactacgctgtcaacttccccctcagggacgggattgaggacgagtcgtacgag
cagatcttcaagcctgtgatggctaaggtgatggagatgtaccagcccagtgccgtggtc
ctgcagtgtggagcggactctctctccggggaccgactcgggtgtttcaacctcactatc
cgtggccacgccaagtgtgtggagtacatgaagtccttcaacctgcccctgctcatgctg
ggcggagggggctacaccatccggaacgtggcccgatgctggacctacgagacggccgtg
gctctggacaccgagatcccagacgaactgccctacaatgattactttgagtacttcggc
cctgacttcaagctgcacatcagcccgtctaacatgaccaaccaaaacacaatggagtac
atggaaaaaatcaaacagcgtctgtttgagaacctgcggatgttgcctcacgcaccggga
gttcagatgcaggccatcccggaggatgccatcccagacgataccgtggacgaggacaca
gacgacccagacaagcgcatgtccattcgtgcctcagacaagaggatagcctgcgacgag
gaattctccgactccgaggatgagggagagggaggcaggaggaacgtggccagcaacaaa
aaggccaaacgctcccgagtggaagaagacaagaaggagggagaggagaagaaagttgag
gtgaaagaggaggagaaagataaggaaagcagcacagggaagattgacacaaaaagtgtg
aagactgaacagaccagcagcacctga

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