Osmerus eperlanus (European smelt): 134025225
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Entry
134025225 CDS
T10927
Name
(RefSeq) LOW QUALITY PROTEIN: afadin-like
KO
K05702
afadin
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04517
IgSF CAM signaling
oep04520
Adherens junction
oep04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134025225
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134025225
04530 Tight junction
134025225
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Motif
Pfam:
PDZ
PDZ_6
PDZ_2
G_path_suppress
Motif
Other DBs
NCBI-GeneID:
134025225
NCBI-ProteinID:
XP_062324108
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All DBs
Position
8:complement(13811367..13829075)
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AA seq
970 aa
AA seq
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VCVCVVLQGAGQEKLGIYIKSVVKGGAADMDGRLAAGDQLLSVDGRSLVGLSQERAAELM
TRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMPRASDRGRDKNGKLRPKSEGFELYNNSV
QNGSPESPQAGWDSYPEPKKTNEERLLKNRVDHRSSPNVANQSQSPAGKAVYPGGPGTKI
TSVSTGNLCADDEPSPPRPEAYPIPTQTYPREYFTIPASKSQDRVGPGPGQHWHGPDDRG
HPVAMEEHLNNSMAMQRVAQSQEDLQGGGYPPPGGLRPEDLVHLQHHREAEFQREAEFQR
EAEFQREAEFQREAEFQRGGGDHWGNHGNHGQVSSSVESSTSSQEHLNYSSSSKTPGNHK
SGPGRWKTPNAPHPGPAAPQPSRSDLPPPPPPPPPVHYPDFEAQPDLPPPPPPSAGPSQA
ALAAERRKREEQQRWYEKEKARLEDERERKRREQERKLGQIRNPAVPLNNNNASQPPPQH
QAPPPSMPQAYLPPQPQPYLPPQPPRPAEKVSSLPRTAVAPGPPQDTVIRELLPQQQPRT
IERRDLQYITISKEELSSSDSLSPDPWKRDAREKLEKQQQLHIVDLLDKEIQDLQAKPER
TAEESDRLRKLMLEWQFQKRLQESKQSDEDEEEEDDEDVDTMMIMQRLEAEKRARQQTAV
PAAISVLDLLQDEERRRKQQLEELRQREAEERSKQEEERRWREEERVRRETDEKRRQEEE
YYTRLEAGRRRQHEEAERRLLTPDEPGLYRPPLPQDYQLPSPASPTNTPLSQPPPPPPQR
NTSYLKTQVVSPDTLYTAKFVSYGGEEEEEEEEEEDSATVVAAGMGLAGQVKMAATRKSY
GDLPPARKPPPTARKPRPVSDGIFLSSSFNANSTGHTPPIPAKPGYAPKGFNSYTGNPAG
VVGAGELYKDPREKWTKSGQEQENANPGGAPESLTFKERQRLFSQGKEISNKVKASRKLM
ELENELNTKQ
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcgtgtgtgtggtcctgcagggtgccggccaggagaagctggggatctacatcaag
tccgtggtgaagggtggagcagccgacatggacggccgtctggcagcaggggaccagctc
cttagtgttgatgggaggagcctcgttggactctcacaggagagggcggcagagctgatg
accaggacaggctcggtggtgactctggaggtcgccaagcagggcgccatctaccacggc
ctggccacgctgctcaaccagccctctcctatgatgcccagggcctcggacagagggcgt
gacaagaacgggaagttgagaccaaagagcgagggcttcgagctctacaacaactctgtc
cagaacggctcccctgagagcccccaggcgggctgggactcctaccctgaaccaaagaag
accaacgaggagaggctgctgaagaaccgggtggaccaccgctccagccccaacgtcgcc
aaccagagccagagtcctgctggcaaggctgtgtaccccggcggccccgggaccaagatc
acctccgtctccactggcaacctctgcgccgatgatgagccctccccccctcgcccagag
gcctaccccatccccacccagacctaccccagggagtacttcaccatcccagcctccaag
agccaggaccgcgtggggcccgggccaggccagcactggcacggccccgacgacaggggc
caccccgtcgccatggaggagcacctcaacaacagcatggccatgcagcgagtggcccag
tctcaggaggacctgcaaggagggggctacccccctccaggggggctgaggccagaggac
ctggtgcacctgcagcaccacagggaggcggagttccagcgggaggcagagttccagcgg
gaggcggagtttcaacgggaggcagagttccagagagaggctgaattccagcgagggggg
ggcgaccactgggggaaccacggcaaccacggtcaggtgtcgtcgtcggtggagtcgtcc
acctccagccaggagcacctcaactactcctcctcctccaagacccccggcaaccacaag
agtggccccggccgctggaagacccccaacgccccccaccccggacccgccgccccccag
ccctcgcgctccgacctaccccctcccccgccgcctcctccccccgtccactatccggac
ttcgaggcccagcccgacctccccccgcccccgcctccgtccgcgggcccctcccaggcg
gccctggcggccgagcgcaggaagcgggaggagcagcagcgctggtacgagaaggagaag
gcccggctggaggacgagagggagaggaagaggagggagcaggagaggaagctgggccag
atccgcaaccccgccgtgcccctgaacaacaacaacgccagccagcccccgccgcagcac
caagccccgcccccctccatgccccaggcctacctgcccccccagccccagccctacctc
cccccccagccccccaggccggcggaaaaagtatccagcctgccccgcacggccgtggct
cccggccccccccaggacacggtgatcagggagctcctcccccagcagcagccacgcacc
atcgagagacgagacctccagtacatcaccatcagcaaggaggagctgtcgtccagcgac
agcctgtcacccgacccctggaagagagacgccagggagaagctggagaaacaacagcag
ctccacatagtagacctgctggacaaggagatccaggatctacaggccaagccggagcgc
acagcggaggagagcgaccgcctgaggaagctgatgctggagtggcagttccagaagcgt
ctgcaggagtccaagcagagcgacgaggacgaagaggaggaggacgacgaggacgtggac
accatgatgatcatgcagaggctggaggctgagaagagggcacggcagcagactgctgtg
ccagcagctatctctgttctagacttgttgcaggacgaggagaggcggcgtaagcagcag
ctggaggagctgcgtcagcgcgaggccgaggagcgctccaagcaggaggaggagaggagg
tggagggaggaggagcgggtcagacgggagacggacgagaagaggaggcaggaggaggag
tattacacccgcctggaggcggggcgtcggagacagcacgaggaggcggagcgccggctg
ctgacgccagacgagccgggtctgtaccggccacccctcccccaggactaccagctcccc
tcccccgcctcccccactaacacccccctgtcccagcccccgccccccccgccccagagg
aacacctcctacctcaaaacgcaggtggtctcccccgacaccctgtacaccgccaagttt
gtctcctacgggggcgaagaggaagaggaggaggaggaggaggaagattccgcaacggtg
gttgccgcggggatgggcctagcaggtcaggttaagatggccgccaccaggaagtcgtac
ggcgacctcccgcccgctcgcaagccgccgcccactgcgcgcaagccccgcccagtctcg
gacgggatcttcctgtccagctcgttcaatgccaacagtactggccacaccccccctatc
cccgccaaacccggctacgcccccaaaggatttaactcatacactggaaacccagcagga
gttgtaggagcgggagagctctacaaagacccgcgggagaaatggacgaaaagtggtcag
gagcaggagaacgctaaccctggcggagccccggagagcctgacctttaaggagcgccag
cggctcttctcccagggcaaggagatctccaacaaggtcaaggcttcacgcaaacttatg
gagctggagaacgaactcaacaccaaacagtag
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