Osmerus eperlanus (European smelt): 134025248
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Entry
134025248 CDS
T10927
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134025248 (prdm1c)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
134025248 (prdm1c)
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Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
B129_C2H2-zf
zf-C2HE
Cpxcr1_C
Teflon_N
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
134025248
NCBI-ProteinID:
XP_062324132
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All DBs
Position
8:16897954..16910150
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AA seq
814 aa
AA seq
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MVIFYILIFHSLCLCLCLCLSLSLQASASQHDTAMLISEGSPSTLGVVLATAATTVEWDV
DMTAWSEAKFEERCTYTVKDQLLDSDPEGDKDRTQAERSLPRNLAFKRCPESTEVLGVTS
IELIPKGTRFGPLVGQSYTNETVPKNANRKYFWRVFSEGRLHHILDGLDEDRSNWMRYVN
PACRPEEQNLAACQTGMAIYFYTVQPVCPGQELLVWYCPEFAQRLNCLPPPGRLVTERMG
QSGSQEKTSEKRGYSVSEILRKEPTKHHPTSSPLRPTSPPSRHPVFPLCPQVVYPIHPCV
DLLDHPSYKPVRYCGPSTPSRPASGPVAPHIHFPVKHNLGSLAMGKHYPESSLSGQSNTG
LRHAPYLIPPYPQSLNNILPQPYSFFSDRLQSHLPHPLLSFEGYLHFPPPPASEHTPLAL
PVALTTSNKGSTCTLTNRGKDFEDFTTSTNIYLRNPLVRIEDSYRDLKHSPSFPYEDLSP
PTTSGASSVATSLRDVSSPLTPSGGSPAMGLAVSVRLPSKSTSAILRSGHLAGGAVDLRK
VKRGRVIGYKTLPYPLSRQNGKIRYECNICGKIFGQLSNLKVHLRVHSGERPFRCQTCSK
DFTQLAHLQKHFLVHTGEKPHECQVCHKRFSSTSNLKTHQRLHSGERPYLCKLCPARFTQ
FVHLKLHKRLHSGERPHHCQHCYRSYLHRCSLQVHLQGFCPAPAPSSNLPHGLLQEELHR
VNAEIDRFDLSEAAERLETMAVEAEIEKGSIGTLIRETELVTSSHQGCTGETLSLEHNGY
EVARKSLVLRLHHSGTLPHDPTNIKQEKGCSSEV
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggtaatattttacattcttatcttccactctctctgtctttgcctgtgtctctgtctc
tctctctctttgcaggcctctgcctcccagcacgacacagccatgctcatctcagagggg
tcgcccagcaccctaggggtcgtcctcgccaccgcggcaacgacagtcgagtgggacgtg
gatatgacggcatggagcgaggccaagttcgaggagaggtgcacgtacacggtgaaggac
cagctgttggacagtgaccccgagggggacaaggacaggacccaagcagagaggtctcta
ccgaggaacttggccttcaagcgatgtcccgagtccacagaagtgcttggagtgaccagc
attgagcttattccaaaggggacacgattcggccccctggttgggcagagctacaccaat
gaaacggtccccaagaatgcaaacaggaagtacttttggagggttttctccgaaggccga
ttgcatcacatcctggacggcttggatgaggacaggagcaactggatgcggtatgtcaac
ccagcgtgtcgtccggaagagcagaacctggcagcatgccagactggcatggccatctac
ttctacaccgtacagcccgtgtgcccaggccaggagctgctggtgtggtactgcccagag
tttgcacaacgcctcaactgccttccacccccaggacggctggtgacggagaggatgggg
cagagtgggagtcaggaaaagacctcagagaagagaggatacagtgtgtcggaaatcctc
aggaaggagcccaccaagcatcatcccacctccagccccctaaggcccaccagcccccca
tcccggcaccctgtcttccctctgtgtcctcaggtggtctaccccatccacccctgcgtc
gacctcctcgatcatcccagctacaaacctgtcagatactgtggcccttcaacccccagt
agaccagcaagtggtcctgtagcaccccatatccacttccctgtcaagcataacctgggt
tctcttgccatgggcaaacattacccagagtcctctctgtctggtcaatcaaacacaggt
ctacggcatgcaccctacctcattcctccctacccacaaagcctcaacaacatcctacct
caaccatactccttcttcagtgatagacttcaatcccatcttccacatcccttactttct
tttgaaggttatctgcatttcccccctcccccagccagtgagcatacacccctggcactt
cctgtagcattgaccactagcaacaaaggcagcacttgcactctgacaaatagaggcaaa
gatttcgaagacttcacaacttcaactaatatctacctcagaaacccacttgttaggata
gaggacagctacagggacctgaagcattccccatccttcccttacgaggatctctctcct
ccaactacctccggtgcctcatccgtggccacctccctcagggatgtatcgtcccctctc
acacccagcggaggttcacctgcgatgggcttggctgtctcagtccgcctgccctccaag
tccacctctgctattctgaggtccggccatctagctgggggggcagtagatctccgcaag
gtcaagcgagggcgggtcatcggatacaagaccctcccctatcccctcagcaggcagaat
ggaaagatccggtacgagtgcaacatctgtggcaagatcttcgggcagctgtcaaacctc
aaggtgcacctgcgcgtgcatagtggcgagcgccccttccgatgtcagacctgcagtaag
gacttcactcagctggctcacctgcagaaacatttcctggttcacactggagagaagcca
catgagtgccaggtgtgccacaagcgtttcagcagcaccagcaatctcaagacccaccag
cgactccactctggggagaggccctacctgtgcaagctgtgtccggcacgcttcacccag
tttgtccatctgaagctccacaaacgcctccacagtggggagcgccctcaccactgccag
cactgctaccgctcctacctccaccgctgcagtctccaggtacatctccagggcttctgt
ccagccccggccccctcctcaaaccttccccatggcctcttgcaggaagagctccaccgc
gtcaatgcagagatcgacaggttcgacctgagcgaggccgcggagcgcctggagactatg
gcggtcgaagcagagattgagaaggggagcatcggcactctgattcgggaaacggagctg
gtgacctccagccaccagggctgcactggcgagacgctgtctttagaacataacggctac
gaagtagcgaggaaatcgttggtcctcaggctgcatcacagcggcactctacctcatgat
ccgaccaacatcaaacaagagaaaggctgtagctcagaggtgtga
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