Osmerus eperlanus (European smelt): 134025398
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Entry
134025398 CDS
T10927
Symbol
rbm25b
Name
(RefSeq) RNA-binding protein 25b isoform X1
KO
K12822
RNA-binding protein 25
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134025398 (rbm25b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134025398 (rbm25b)
Spliceosome [BR:
oep03041
]
Complex A
U1 snRNP components
U1 related factors
134025398 (rbm25b)
Complex B
134025398 (rbm25b)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
134025398
NCBI-ProteinID:
XP_062324383
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Position
8:19066285..19075226
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AA seq
807 aa
AA seq
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MSFPPHLNRPLLPPGIPPPQFGYPSGAPMIPLHMGIMTPAPAVLVPTSVSVVSKPPVPRK
EAPPLRAKESVESNGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAF
GFCEYKEPESTLRALRLLHELQIGEKKLLVKVDAKTKAQLDDWKAKKKSTNGEKVEDGGN
EEEEELDEDIKKRDQIVKGAIDGLICEFASELNAASLDDDSHRRKKKKEKKGEEDINAID
MEEDKRDLISREISKFRDTHKKLEEEKDKKEKERQEFERERREREKERERERERRDRERE
KEREKERDVDRDRERERRPKERPPREREWERERSPERSADRSRSREKSRDKSRDKEKKRE
REEDEEEVYERRRLERRLRDKEAAYQERLKNWEIRERKKARDYSKDSEREEERRREMAKE
GKRLKEFLEDYDDDRDDLKYYRGSALQKRLRDREKEIEMDERDRKREKEELEEIRQRLLA
EGHPDPDAELRRVCMEEEAERLSRALVKPEPEVERERPKLPREDRERRGDRDRKRDRGEA
HARQAPSENDAEEESLDGASRPEAKPRLKPTLRPITAAPSVSSASENVTPNSPGDESPCG
IIIPHENSPSEAPPLEEIRPKIGLSLKLGSTASPSQPHAAKRKRLAADSVFNKFGEEEAD
EQPRRRKLVPLNYDDDDKSLGVDGAGLANIKGVDTEEKRRHIKSLIEKIPTGKPELFSYT
LDWSMVDTNLMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHGTPQGILDDVAMVLD
EEAEVFIVKMWRLLIYETEAKKIGLAK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcctcctcacctgaatcgacccctactaccacctggaattcctcccccccaa
tttggttacccttccggagcccctatgatcccattgcacatgggcatcatgactcctgca
cccgctgtcctggtgccaacctcagtgtcagtggtcagtaagccacctgtgcccaggaag
gaggcccccccattgcgagccaaggagagtgtggagagcaacggccccaccaccaccgtc
tttgtggggaacatatcagagaaggcctcggatatgctgattagacaactcctggcgaaa
tgtggcctcgttcttagctggaagagagtccaaggagcctctggaaaacttcaagcattt
gggttttgcgagtacaaggagccagaatccactctgcgagcgttgcggttgcttcacgag
ctacagatcggggagaagaagctgctggtgaaggtggacgccaagaccaaggctcagctg
gacgattggaaggccaagaagaagagcactaatggggaaaaggttgaagatggaggcaat
gaggaagaggaggagctggatgaagatattaagaagcgggaccagattgtcaagggtgcc
attgatgggctgatttgcgagtttgccagtgagctcaatgctgcatcactggacgatgac
tctcatcggcgcaagaaaaagaaagagaaaaaaggagaggaggatatcaatgcaattgac
atggaggaagacaagagagacctgatttccagagagatcagtaaattccgtgacacacac
aagaaactcgaggaggagaaggacaagaaggagaaggagcggcaggagtttgagcgggag
aggagggagcgggagaaggagagggagcgggagcgggagcgcagggaccgggagcgagag
aaggagcgcgagaaagagcgcgacgtggaccgcgaccgggaaagagagcgaaggccgaag
gagaggcctccccgggagagagagtgggaaagggagaggagccctgagaggagcgcagac
cgcagcaggtccagagagaagagccgagacaagagccgagacaaggagaagaagagggag
cgggaggaggatgaggaggaggtgtatgaacgcaggagattggagagaaggctcagagac
aaggaggcagcctaccaagagcgcctgaagaactgggagatcagagagaggaagaaggcc
agggactactccaaggactctgaaagagaagaagaacgcaggcgagagatggctaaagaa
ggcaaacggctgaaagagttcctggaggactacgatgatgacagggacgacctcaaatat
tacaggggaagcgcgctgcagaagcgcctgcgagaccgagaaaaggagattgagatggac
gagcgggacagaaagagagagaaggaagagctggaggagatcaggcagaggctgctggcc
gagggacaccctgaccccgacgccgagctacgcagggtgtgtatggaggaggaggcggag
cgtttgagcagagccctggtgaagccagagcccgaggtggaaagagagagaccgaagctc
cccagggaggaccgcgagaggagaggagaccgcgaccgcaagagagaccgcggtgaggca
cacgctcgccaagccccctccgaaaatgatgcggaggaggagagcttggacggggccagt
cgtccggaagccaagccccgcctcaagccgacgctgcgcccgatcacggcggccccctcc
gtctcgtcagccagtgagaacgtgacgccaaactcccccggggacgagtcgccatgcggc
atcatcatcccccacgagaactcgccctcagaagccccccccctggaggagatccgcccc
aagatcggcctcagcctcaaactaggctccacggccagccccagccagccccacgctgcc
aagaggaagaggctggcggccgacagcgtcttcaacaagtttggcgaggaggaggctgac
gagcagccgcgccggaggaagctggtgcccctgaactacgacgacgacgacaagagcctg
ggcgtggacggagccggcctggccaacatcaagggcgtcgacacagaggagaaacgcagg
cacatcaagagcctgatcgagaagatccccaccggcaagcctgagctgttctcctacacc
ctggactggtccatggtggacacgaacctaatggagcgacgtatccggccgtggatcaat
aagaagatcatagagtacatcggagaggaggaggcaaccttagtagactttgtctgttcc
aaggtgatggctcacggcacaccacagggtatcttggacgatgttgctatggtgcttgat
gaagaagctgaggtcttcattgtgaagatgtggaggttgttgatctatgagaccgaagca
aagaaaattggattggcgaaatga
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