Osmerus eperlanus (European smelt): 134026163
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Entry
134026163 CDS
T10927
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134026163
Transcription factors [BR:
oep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
134026163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Rrn6_K-rich
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
134026163
NCBI-ProteinID:
XP_062324636
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Position
9:16153330..16155584
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AA seq
284 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNAGNNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSVLLLQGNMSH
PSASSYPMTGLGGAQSVHGMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatattaccgtcgtttgggtttactcaagagcaggtcgcctgcgtatgcgaggtg
ctgcaacagggagggaacctggagagactaggacgcttcctctggtctctacccgcttgc
gaccacctccacaagaacgagagcgtactcaaagcaaaggcagtggtcgcattccaccga
gggaacttcagggagctctataagatcctggagagccaccagttttcgccccacaaccat
cccaagctacagcagctgtggctgaaagcgcactacgtggaagcggagaaattgcgcggc
cgaccactcggagccgtagggaagtatagggtccggaggaaattccctttgccccgcacg
atatgggacggcgaggagacaagttactgctttaaggagaagtccaggggtgttctgaga
gagtggtacacgcataacccatatccctccccaagggaaaaaagagaattggccgaagcc
acgggattgaccactacacaagtcagcaactggttcaaaaacagacggcagagagataga
gcggctgaggctaaagaaagagagaacagtgaaaacaacaacgccggtaacaacaaacag
aaccagctgtctcccctcgacggcggcaagtcgctgatgtccagctcggaggatgaattc
tctccaccgcaaagccccgatcagaactctgtgcttttgctccagggaaacatgagtcac
cccagcgcctcctcttaccctatgacgggcctcggtggagcacagtcggtgcatggaatg
cacggacacccgcaccaacttcaagactcgttgttgggaccgctaacatctagtcttgtg
gatctagggtcctaa
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