Osmerus eperlanus (European smelt): 134026290
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Entry
134026290 CDS
T10927
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03040
Spliceosome
oep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134026290 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134026290 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134026290 (srsf5a)
Spliceosome [BR:
oep03041
]
Common components
Common spliceosomal components
SR proteins
134026290 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
134026290
NCBI-ProteinID:
XP_062324888
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All DBs
Position
9:4306447..4311449
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AA seq
339 aa
AA seq
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MSGCRLFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRKGRGGGAGMGGGGGGRDGGGGGGGGGGGRFSPRFSNSRQSRSSGS
RYGPPVRTEHRLIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMK
NAISKLDGTDLNGRKLKLFEDRRRSRSRSRSRSRSYSRSRSRSRSKSRSRSRSRSASRTP
EKKPSGGKAAPRSPSRSLSRSPARPRSRTPVRARSPARSRSPARPKSHSPAGPRSRSPAR
SRSPARSRSPVRPRSNSRSHSRSPAPRKQSRSPSAESQH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtgtcgtttattcattggtcgtttgagcccccatgcccgagaaagagacgtg
gaaaagtttttcaaaggatacggacggatccgagaaattaatttgaaaaatggatttggc
tttgtggagtttgatgaccatagagatgcagatgatgcagtatacgagttaaatggcaaa
gaactttgtagtgaaagggtgaccattgagcatgcccgctccaggaagggcaggggaggc
ggtgctgggatgggtggaggtggaggaggacgagatggtggtggtggtggtggtggagga
ggagggggacgcttctccccacgcttcagcaactctcggcagtctcgcagcagtggctcc
aggtatggcccccctgtgcggactgaacacagactcattgtggaaaacctgtcttccaga
attagctggcaggacctgaaagacctgatgaggaaagtcggagaggtcacctttgtggac
gcccacagaacaaacaagaacgaaggagtggtcgagttcgcctcccacagtgatatgaag
aacgccatttccaagctggatgggacagacctgaatggacgcaagctgaagctgtttgag
gatcgcaggaggagccgcagcaggagccgttctcggtcccgcagctactcccgttctcgt
tcccgctctcgctccaagtcccgctccaggagccgctcgcgctcggccagccgcaccccg
gagaagaagccctcagggggcaaggccgcccctcgctccccctcccgctccctgtcccgc
tcccccgcccgccccaggtccaggaccccggtccgggcccgctcccctgcccgttccagg
tcccccgcccggcccaagtcacactctcccgccgggcccaggtccaggtcccccgccagg
tccaggtcccccgccaggtccaggtcccctgtccggcccaggtccaactccaggtcccac
tccaggtccccggccccgaggaaacagtcccgctccccctcagctgagagccagcactga
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