Osmerus eperlanus (European smelt): 134026370
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Entry
134026370 CDS
T10927
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
oep Osmerus eperlanus (European smelt)
Brite
Lectins [BR:
oep04091
]
C-Type lectins
Others
134026370 (atrn)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
134026370
NCBI-ProteinID:
XP_062325039
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Position
9:complement(5521143..5570949)
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AA seq
1383 aa
AA seq
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MDKAVRRACIGFDRSLSCGLIEGPRGSMLKTLLLFCVFGLLCGLPRFTEAKECDKPCLNG
QCNTATGSCLCNPGWVGDQCQHCGGRFRLSGPSGFLTDGPGNYKYMTKCTWLIEGQPNSI
LRLRFNHFATECSWDHLYVYDGDSIYAPLLAAFSGLIVPEHYGNETVPEVVSRSGFALLH
FFSDAAYNLTGFNVSYRVNTCPNNCSGRGECSVGNSTASVVCECEEGWKGEACDTPYCVS
DCGSPVRGHCSLQNKTCVCNPGWQGPDCSVSVPANWSFWTREEYSVPGLARASHKAVVHE
GVMWVVGGYVFNSSDYHMVQALDLQTQRWLPLNRSVNSVMGRYGHTVALHEGKIFMYGGK
MDSTGNVTNQLWVFHTQNQSWAQLSPRGKEQYAVVGHSAHIVPPLLDGGSPVMLVMFGHC
PLYGYINQVQQYDIGQNVWSMVNTDGALVQGGYGHSSVYDPLSRSIYIHGGYKAFSANKY
GLAGDLYKYKVDSSKWTVLKDSGFFRYLHTAVMVDRTMLVFGGNTHNDTSMSHGAKCFSS
DFMAYDLVCDEWSVLPRPDLLHHLNRFGHSAVYSDSVMYVFGGFNSLLLSDVLRYTPANC
SGLPSPESCSGGGPGLRCLWNTTQGVCLPWGGPDPQSPGPQPPGCGARTYADSQRCDQYT
DCYSCTANTNGCMWCGLQCVSLGSNCTAAAGPIAEYEVCPKDNPSYVCNKKTSCKSCAIN
PNCQWETRNQECISLPENVCGESWRLVGNSCMKFITANDSYDNAKLTCRSHNNAVLASLT
TQKKVDFVLKELQIMNVLYKATMTPWVGLRKINVSYWCWEDMSPFTNSSLQWLEGEPSDA
GFCGYLAEPHAGGLKAHTCISPVNGSLCERAANLSAKQCRTPCALRSSCSECTSSSSECM
WCSNMRQCVDSNAYVASFPFGQCMEWYTLNSCPPESCLGYRTCGQCLDQPGCGWCTDPSS
TGRGQCMEGSFRGPFQSPVPAPSKQPGLGYTPPPALNASMCPSQSKYNWSFIHCPACQCN
GHSQCVNQSECEKCEDLTTGRHCESCIAGYHGDPTNGGNCQPCKCNGHASMCNPNNGKCF
CTTKGIKGDHCQLCELENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATP
DEQNRDLDMFINASKNFNLNITWAASFTAGTQTGEEIPIVSRSSIKEFKDSFSNENFDFR
NNPNITFFVYVSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQS
CWASRRREQLLREMQQMASRPFATINVALETDEEPPDLIGGNVKTVPKPIALEPCFGNKA
AVLSIFVRLPRGSRGIPPPGQSGLAVASALVDVSQQMCVGFKDKSGGLRSRKQQPSAQPS
TCI
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggcagtacggcgggcctgcataggctttgaccgtagcctgagctgcgggttg
atagaaggtccccgcggctctatgctgaaaacgctgctactgttctgtgtcttcggtttg
ctctgtgggcttcctaggttcaccgaggctaaagaatgcgacaagccgtgcctcaatggg
caatgcaacactgctactggcagctgtttgtgtaacccaggctgggtcggggaccaatgc
caacactgcggaggaaggttcaggctgtctggaccctctggcttcctgaccgacggccca
gggaactacaaatacatgaccaagtgcacctggctcatcgagggacagcccaacagcatc
ctgcgactgcggttcaaccactttgccactgagtgcagctgggaccacctgtacgtgtac
gacggagactccatctacgcccctctgcttgcggccttcagtggcttgattgtgcctgaa
cactatggcaacgagacagtcccagaggtggtgtctcgttctggcttcgccctgctgcac
ttcttcagcgacgctgcctacaaccttacaggcttcaacgtctcctacagagtgaacacc
tgtcctaataactgttcagggcgcggggagtgcagcgtggggaactccacagcctcggtg
gtgtgtgagtgtgaggagggctggaagggtgaggcttgtgacaccccctactgtgtgtct
gactgtggatcgccagtgcggggccactgcagcctccaaaacaagacctgcgtctgcaac
cccggctggcaaggtcccgactgctcagtgtcagttccagccaactggtcgttctggacg
cgggaggagtacagcgtgccgggcctggcgcgggcctcccacaaggccgtggtgcacgag
ggggtcatgtgggtggtgggaggatacgtgttcaactcctcagattaccacatggtccaa
gccctggacctgcagacccagcgctggctgcctctcaaccgctccgtcaactctgtcatg
ggccgctacggacacactgtggccctgcacgagggaaagatcttcatgtacggggggaag
atggactccacgggcaacgtgacgaaccagctgtgggtgttccacacccagaaccagagc
tgggcgcagctgagcccgcggggcaaggagcagtacgctgtggtgggccactcggctcac
atcgtgccccccctgctggacggaggcagccccgtcatgctggtcatgtttggacactgc
ccgctctacggctacatcaaccaagtgcagcagtacgacataggtcaaaacgtgtggagc
atggtgaacacggacggggcgctggtccagggggggtacggccacagcagcgtgtacgac
cccctgtccagatccatctacatccatgggggctacaaggccttcagcgctaacaagtat
ggactggccggagacctgtacaagtacaaggtggacagcagcaagtggacggtcctgaag
gacagtggtttcttccgctacctgcacacggcggtcatggttgacagaaccatgctggtg
ttcggagggaacacgcacaacgacacgtccatgagccacggggccaagtgcttctcctcc
gacttcatggcctacgatctggtgtgtgacgagtggtcagtgctgcccaggccagacctg
ctccaccatctcaaccgcttcggacactctgccgtctacagcgacagtgtgatgtatgtg
tttggaggcttcaacagtctgttgctgagtgatgtcctgaggtacactccagccaactgc
tcaggcctgcccagcccagagagctgctctggaggaggccctggcctgcgctgcctctgg
aacaccacccagggtgtctgcctgccctgggggggccccgacccccagtctcccggcccc
cagccccccgggtgcggtgcccgcacatatgctgacagccagcgctgtgaccagtacaca
gactgctacagctgtacagccaacaccaacggctgcatgtggtgtggcctgcagtgtgtg
tccctggggagcaactgcacagcagcagcgggccccatagcggagtatgaggtgtgcccc
aaggacaacccctcatacgtgtgcaacaagaagaccagctgtaagagctgtgccatcaac
cctaactgccagtgggagacccgcaaccaggagtgcatctctctgccagagaacgtgtgt
ggggagagctggaggctggtggggaactcctgtatgaagttcatcacggctaacgactcg
tacgacaacgccaagctgacctgccgcagccacaacaacgccgtgctggcctccctcacc
acgcagaagaaggtggactttgtcctcaaggagctgcagatcatgaacgtgctgtacaag
gcgacgatgactccgtgggtgggcctgaggaagatcaacgtgtcgtactggtgctgggag
gacatgtcccccttcaccaactcgtccctgcagtggctggagggcgagcccagcgacgcc
ggcttctgtggctacctggccgagccccatgccgggggcctcaaggcgcacacctgcatc
agccccgtcaacggcagcctctgtgaacgcgctgccaacctcagtgccaagcagtgtcgc
acgccctgtgcgctgcgctccagctgcagtgagtgcaccagtagcagctcagagtgcatg
tggtgcagcaacatgaggcagtgcgtcgactccaacgcctacgtcgcctctttccctttc
ggacagtgcatggagtggtacaccctgaacagctgccctccggagagctgtttggggtac
cggacatgtggccagtgtctggaccagcctggctgtggctggtgtacggaccccagcagc
acaggcaggggtcagtgcatggagggctccttcaggggccccttccagagccccgtcccg
gccccctccaagcagcccggcctgggctacaccccccctccggccctcaatgccagcatg
tgcccctcccagagcaaatacaactggtccttcatccactgcccagcgtgccagtgtaac
ggccacagccagtgtgtgaaccagagtgagtgtgagaagtgtgaggacctcaccactgga
cgccactgcgagagctgcattgctggttaccacggagatcccaccaacggaggcaactgt
caaccctgcaagtgtaacggccatgccagcatgtgcaaccccaacaacggcaagtgcttc
tgtaccaccaagggcatcaaaggagaccactgccagctgtgtgaactagagaaccgttac
caaggcaacccactcaagggaacatgttactacacgttgctgatcgactaccagttcacc
ttcagcctatcacaggaagacgatcgctactacaccgccatcaacttcgtagccacgccc
gacgagcaaaatcgggatttggacatgttcatcaatgcttccaagaacttcaacctgaac
atcacctgggcagctagcttcacagcagggacccagactggagaggagatacccattgtg
tccagaagcagcatcaaggagttcaaggacagcttctccaacgagaactttgacttccgc
aacaacccaaacattacattctttgtgtatgtcagcaacttcacatggcccattaaaatc
caaattgccttctctcagcacagtaacttcatggatctcgtccagttcttcgtcacattc
ttcagctgcttcctgtctctgctgctggtggccgctgtggtctggaagatcaaacagagc
tgctgggcgtcacggcgacgagagcaactgctccgggagatgcagcagatggccagccgg
cctttcgctaccatcaacgtcgccttggagacggacgaggagccgcccgacctgattgga
ggaaacgtcaagacggtgcccaagcccatagccctggagccgtgcttcggcaacaaggct
gcagttctctccatctttgtgcgattacccagaggctcccggggcattccccccccagga
cagtctggcctggcggtggccagtgcgctggtggacgtgtcgcagcagatgtgtgtgggc
ttcaaggacaaaagcggaggactgaggagccgcaagcagcagcccagcgcccagccctcc
acctgcatctga
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