Osmerus eperlanus (European smelt): 134026371
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Entry
134026371 CDS
T10927
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04814
Motor proteins
oep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
134026371 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134026371 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134026371 (dctn1b)
03036 Chromosome and associated proteins [BR:
oep03036
]
134026371 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134026371 (dctn1b)
Membrane trafficking [BR:
oep04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
134026371 (dctn1b)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
134026371 (dctn1b)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
134026371 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Gemin7
DUF3713
Motif
Other DBs
NCBI-GeneID:
134026371
NCBI-ProteinID:
XP_062325042
LinkDB
All DBs
Position
9:5186652..5215687
Genome browser
AA seq
1277 aa
AA seq
DB search
MSQTRRNTYTRTTSSGSSRMSSDGGGRPAKVGSLVEVIGKGQRGTVAFIGATLFASGKWV
GVILDEAKGKNDGTVQGKRYFTCEENHGIFVRQSQIQLVDDGADTTSPETPEPATSKVPK
RDILDTPKSNKLRGVKPKKVAHASRTSTPAPRKTTARRPKPTRPTGTSKPGASGSASAGE
MSSSEPSTPAQTPLAAPVIPTPGGLLSPGAPPPPLPSKEEESLRGQVKDLEEKLETLRMK
RSEDKTKLKELEKSRIQLEQLQEWRSKMQEQQAELQKQLKEAKKEAKEALEAKEHYMEEM
ADTADAIEMATLDKEMAEERAESLQQEADSMKEQVEELTMDLEILKHEIEEKGSDGAASS
YHVKQLEEQNGRLKEALVRMRDLSSSEKQEHVKLQKQMEKKSLELEVLRSQREKLQEELA
LAEKTVDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQEN
ARETELELREQLDLGAARIREAEKRVEAAQETVADYQQTIKKYRELTTHLQEVNRELTSQ
QEASAEQQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVSQANRQVSLLTSFMPDSFL
RHGGDHDCILVLLLIPRLICKAELISKQAQEKFDLNESCTVRTGLRGGQGEQMSFAAGLV
YSLSLLQATLHRYEQALGQCSVEVYKKVGSLYPEMSIHERSLDLLIDLLHRDQLDETVNV
EPLTKAIKYYQHLYSIHLTEQMEDCTMQLADHIRFTQSALDCMAVEVGRLRAFLHTGQEE
TDLAVLLKDQETSCSDIRQFCKKIRRRMPGTEVPGIPSALTFGTQVSETLLDCRKHLTWV
VAVLQEVAAAGAQMIAPLGEQEGLSALRLEDVAFKAGEQIYGTPGANPYESLRQSCSIVI
ATMNKMATAMQEGEYDAEKPQSRNPPPVEVRAAALRAEITDAEGLGMKLEDRETVVKELK
KSLKIKGEELSEASVRLSLLEKKLDSSSRDADERVEKIQTRLDETQTLLRKKEKEFEETM
DALQADIDQLEAEKAELKLRLSSQSKMTMDGLRGTPPSGIASVVTGMAGEEQKGGGVMAA
MGAGLQVVDSPLLTQQIDAQRLSIKHLKNENNKLKAEKMRVQLASLPPLNVAKLPSRDGA
RPEVLSSALYRKTDQLLDTLLQMSANIKVVDVTGKSPVTPSAQLLEQTARLQSLSDTLDR
LKDEVAEHVVTQRSGARASSDFATFPSTAFVKAKEERRGDTVLVGRVMLPCSRGQEQAHR
LVLSQAELQRVHRLLLT
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagactaggaggaacacgtacacccggaccaccagcagtggcagcagtaggatg
agttctgacgggggcggccggccggccaaggtgggctccctggtggaggtgatcgggaag
ggccagcggggcacggtggccttcatcggcgccacgctattcgcctcgggcaagtgggtg
ggcgtgatcctggacgaggccaagggcaagaacgacggcacggtgcagggcaagcgctac
ttcacctgcgaggagaaccacggcatcttcgtgcggcagagtcagattcagctggtggat
gatggtgcagacaccacgtctcctgagacacctgaaccggctacctccaaggtccccaag
cgagatatcctggacacgcccaagtccaataaactgcgaggagtgaagcccaaaaaggtg
gcacatgcctccagaacctcgactcccgccccacggaagaccacggccagacggcccaag
cccacccggcccacggggacctccaagccgggagcctcaggctcggcttcggccggggag
atgagcagcagtgagcccagcaccccggcccagacccccctggctgccccggtcatcccc
actccgggagggctgctctcccccggggcccccccacctccactgcccagcaaggaggag
gaatccctgcgtggccaggtgaaggacctggaggagaagctggagaccctgaggatgaag
cgctcggaggacaagaccaagctgaaggagctggagaagagccgcatccagctggagcag
ctgcaggagtggaggagcaagatgcaggagcagcaggccgagctgcagaaacagctcaag
gaggccaagaaggaggccaaggaggctctggaggccaaggagcactacatggaggagatg
gcggacacggcggacgccatcgagatggccacgctggacaaggagatggcggaggagcgg
gcggagtctctgcagcaggaggcagactccatgaaggagcaggtggaggagctcaccatg
gacctggagatcctgaagcacgagatcgaggagaaaggctcagacggagctgcctccagt
taccatgtcaagcagctggaggagcagaacggccgactgaaggaggctctggtcaggatg
cgtgacctgtcgtcgtcggagaagcaggagcacgtgaagctgcagaagcagatggagaag
aagagcttggagctggaggtcttgaggagccagagggagaagctgcaggaggagctggcg
ctggccgagaagaccgtagacgagctgaaagagcaggtggatgctgctctgggggcggag
gagatggtggagaccctgacagagaggaacctggacctggaggagaaggtcagggagctg
agagagaccgtcaccgacctggaagccatcaacgagatgaacgacgagctgcaggagaac
gcccgggagacggagctggagctgagggagcagctggacctgggcgcggcgcgcatcagg
gaggcggagaagcgcgtggaggccgcccaggagaccgtggccgactaccagcagaccatc
aagaagtaccgcgagctcaccactcacctgcaggaagtgaaccgggaactgacgagtcag
caggaggcctcggcagagcagcagcagcagcctccagccgagatgttcgacttcaagatc
aagtttgccgagaccaaagcctacgccaaggccatagagatggagctaaggaagatggag
gtgagccaggctaacaggcaggtgtccctgctcacctccttcatgcccgactccttcctg
cggcacggaggagaccacgactgcatcctggtgctgctgctcatcccccggctcatctgc
aaggcggagctcatcagtaagcaggctcaggagaagtttgacctgaatgagagctgtacc
gtgcgtaccgggctgagaggagggcagggggagcagatgagcttcgctgccggcctggtc
tactctctcagtctgctgcaggccacgctgcacagatacgaacaggctctgggtcagtgc
agtgtggaggtctataagaaggtgggctctctctaccctgagatgagcattcacgagcgc
tcgctggaccttctcatcgatctgctgcacagagaccagctggatgaaaccgtcaacgtg
gagcccctgaccaaggccatcaagtactaccagcacctgtacagcatccacctgaccgag
cagatggaggactgcaccatgcagctggctgaccacatcaggttcacccagagtgccctg
gactgcatggcggtggaggtggggaggctgcgagcgttcctgcacacgggccaggaggag
acggacctggccgtgctgctgaaggaccaggagacgtcctgctcggatatccgccagttc
tgcaagaagatccggcgtcgcatgcctggcaccgaagtgccagggatcccgtctgccctc
accttcggaacccaggtgtcggagaccctgctggactgcaggaagcacctgacgtgggtg
gtggccgtgctgcaggaggtggcggctgcaggggcccagatgatcgctcctctgggggag
caggaggggctgtctgccctcagactggaggacgtggccttcaaggctggagagcagatt
tatggaaccccgggtgccaatccgtacgaatccctgcgccagtcgtgcagcatcgtcata
gcaaccatgaacaagatggccaccgccatgcaggaaggagaatacgatgctgagaagccc
cagagcaggaatcctccaccggtggaggtgcgggcggcggcgctgcgtgcggagatcacc
gacgctgagggtctgggcatgaagctggaggacagagagaccgtcgtcaaggagctgaag
aagtccctgaagatcaagggggaggagctgagcgaggccagcgtgcgtctcagcctgctg
gagaagaagctggacagctcgtccagagatgcggacgagcgcgtggagaagatccagacc
aggctggacgagacccagacgctgctgaggaagaaggagaaggagtttgaggaaaccatg
gacgccctgcaggccgacatcgaccagcttgaggcggagaaggcggagctgaaactgcgt
ctcagcagccaatcaaagatgaccatggacggcctgagagggacgcctccgtcgggcatc
gcgtctgtcgtcacggggatggcaggagaggaacagaaaggagggggtgtgatggcagct
atgggggcggggctgcaggtggtagattcccccctgctgactcagcagatcgatgctcag
cgactcagcatcaagcacctgaagaacgagaacaacaagctgaaggctgagaagatgcgt
gtccagctggcctccctgccgcccctcaacgtggccaagctgccgtccagagacggcgcc
cgtccggaggtgctctccagcgccctctaccgcaagactgaccaactgctggacacgctg
ttgcagatgagcgccaacatcaaagtggtggacgtcaccgggaagtctccagtcactcct
agcgcccagctcctggaacagacggccagactccagtctctaagtgacacccttgacaga
ctgaaggatgaggtagcggagcacgtggtgactcagcgttctggcgctcgtgcctcctca
gacttcgccacgttcccctccacggcttttgttaaggccaaggaggagaggaggggggac
acagtgttggtgggcagggtcatgctgccgtgctcccggggtcaggagcaggctcaccgt
ctcgtcctatcacaggctgagctccagagagtgcaccgcctcctgctgacctaa
DBGET
integrated database retrieval system