Osmerus eperlanus (European smelt): 134026494
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Entry
134026494 CDS
T10927
Symbol
actn1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04517
IgSF CAM signaling
oep04518
Integrin signaling
oep04519
Cadherin signaling
oep04520
Adherens junction
oep04530
Tight junction
oep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134026494 (actn1)
04518 Integrin signaling
134026494 (actn1)
04519 Cadherin signaling
134026494 (actn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134026494 (actn1)
04520 Adherens junction
134026494 (actn1)
04530 Tight junction
134026494 (actn1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134026494 (actn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134026494 (actn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134026494 (actn1)
04147 Exosome [BR:
oep04147
]
134026494 (actn1)
Membrane trafficking [BR:
oep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134026494 (actn1)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134026494 (actn1)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134026494 (actn1)
Exosomal proteins of colorectal cancer cells
134026494 (actn1)
Exosomal proteins of bladder cancer cells
134026494 (actn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Motif
Other DBs
NCBI-GeneID:
134026494
NCBI-ProteinID:
XP_062325299
LinkDB
All DBs
Position
9:4364385..4396609
Genome browser
AA seq
891 aa
AA seq
DB search
MDSYDADENCYMPQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRD
GLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALNFITGKGVKLVSIGAEEIVDGNAK
MTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCA
LIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTY
VSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRV
PENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMV
SDISNAWGGLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTTGKEEMLQQRD
YEMASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQSICD
QWDALGTLTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVHTI
EEIQGLSTAHEQFKATLPEADKERQAILGIHNEIAKIVQTYHVNMSGTNPYTAINPQEIN
TKWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGHISIEMH
GTLEDQLSHLRQYEKSIINYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLL
TTIARTINEIENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGAEEFKACLISLGFD
IANDAQGEAEFSRIMSIVDPNRLGLISFQAFIDFMSRETADTDTADQVMASFKVLAGDKS
YILADELRRELPPDQAEYCIARMAPYTGPDAIPGALDYMSFSTALYGESDL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggattcatatgatgcagacgaaaactgttacatgcctcaagaagatgactgggaccgg
gatctacttctggaccccgcgtgggaaaagcagcaaagaaagaccttcacagcctggtgt
aactcccacctgaggaaggccggcactcagattgagaacatcgaagaggacttcagagat
ggtctgaaactcatgctgctgctggaggtcatctcaggagagcgtctggccaaaccagag
agaggcaagatgagagtccacaagatctccaacgtcaacaaagctctgaacttcatcacc
ggtaaaggagtaaagctggtgtcgatcggagcagaggagattgtggatggcaacgccaag
atgacgctggggatgatctggaccataatccttcgcttcgccatccaggacatctccgtg
gaagaaacatctgccaaagaaggccttctgttatggtgccagagaaagactgcaccctac
aagaacgtcaacattcaaaattttcacatcagctggaaagatggcctgggattctgtgct
cttattcatagacaccgtccagagctcattgactacgggaaactgcgcaaggatgacccc
atgaccaacctgaacacggccttcgacgtggcagagaagtacctggacatccccaagatg
ctggacgctgaggacatcgtgggcacggcccgcccggatgagaaggccatcatgacctac
gtctctagcttctaccacgccttctctggcgcccagaaggcagaaacggcagctaacagg
atctgcaaggtgctggcagtgaaccaggagaatgagcagctgatggaggactacgagaag
ctggccagtgatctgttggagtggatccgcaggaccatcccctggctggagaaccgtgtt
ccggagaacaccatgcaggccatgcagcagaagctggaggatttccgggactaccgccgc
ctccacaagccccccaaggtgcaggagaagtgccagctggagatcaacttcaacaccctg
cagaccaagctgaggctgagcaacaggcccgcgttcatgccctccgagggcaagatggtc
tcggacatctccaatgcttggggaggcctggaaggggcagagaagggctacgaggagtgg
ctcctcaacgagatccgcaggctggagagactggaccacctggccgagaagttccgccag
aaagcagctatccacgaagcctggaccacaggcaaggaagagatgctgcagcagcgcgac
tatgagatggcctctctgtccgagatcaaggcgctgctgaagaagcacgaggcgtttgag
agcgacctggctgcccaccaggaccgcgtggagcagatcgccgccatcgcgcaggagttg
aatgagctggactactacgactcccccagtgtgaatgcccgctgccagtccatctgcgac
cagtgggacgctctgggaacgctgacccagaaacgcagcgaggctctccagcgaaccgag
aagctgctggagacgatcgatcagctgtacctggagtttgccaagcgagctgcgccgttc
aacaactggatggagggcgccatggaggacctgcaggacaccttcatcgtccacaccatc
gaggagatccaggggctgagcactgcccatgagcagttcaaagccactctgcccgaggcg
gacaaggagagacaggctatcctggggatccacaacgagattgctaagatcgtccagacc
taccatgtgaacatgtctggcaccaacccctacaccgccatcaacccccaggagatcaac
accaagtgggacaaggtcagacagctggttcctcagagagaccaggccctgatcgaggag
cacgctcgccagcagaacaacgagcggctgcgcagacagttcgccaaccaggccaacgtc
atcggaccctggatccagaccaagatggaggagatcggccacatctccattgagatgcac
gggaccctggaggaccagctgtctcacctgcgtcagtacgagaagagcatcatcaactac
aagccaaagatcgaccagctggagggagaccaccaattgatccaggaggcgctcatcttc
gacaacaagcacaccaactacaccatggagcacatccgcgtgggctgggagcagctgctg
accaccatcgctcgcaccatcaacgagattgagaaccagatcctgacccgcgacgccaag
ggcatcagccaggagcagatgaacgagttccgagcctccttcaaccacttcgacagggac
cactcgggcactctgggtgcagaggagttcaaggcctgcctgatcagcctgggtttcgat
atcgccaacgatgcacagggcgaggcagagttctctcgcatcatgagcatcgtggacccc
aaccgactgggcctcatctccttccaggccttcatcgacttcatgtccagagagactgcc
gacacagacactgccgaccaggtcatggcctccttcaaggtcctggcaggggacaagagc
tacatcctggctgacgagctgcgtagggagctgcctcctgaccaggcggagtactgcatc
gcccgcatggcgccctacaccggaccggacgccatccccggagccctggactacatgtcc
ttctccacagcactgtatggagagagtgacctctga
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