Osmerus eperlanus (European smelt): 134026658
Help
Entry
134026658 CDS
T10927
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04020
Calcium signaling pathway
oep04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
134026658 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134026658 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oep04030
]
134026658 (ptafr)
G protein-coupled receptors [BR:
oep04030
]
Rhodopsin family
Others
Platelet activating factor
134026658 (ptafr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
CitMHS
Motif
Other DBs
NCBI-GeneID:
134026658
NCBI-ProteinID:
XP_062325533
LinkDB
All DBs
Position
9:12874975..12878410
Genome browser
AA seq
444 aa
AA seq
DB search
MDEAQAHGVKIPASSPYRFPVLNSLGHHAFSVDSQELPTEPSVQTTGRMETNTSLDITTT
FYNSSVTQGNRTFLDSEFRYMLFPVFYGIVFILGLLANCYALFILRRLRQSKTMSEIRIY
MINLTMADLLFVCALPLWIGYYSRHGDWIYSDFMCRVAGLLFFINTYCSILFLAAISVNR
YWAISRPLAAASTEHRRRGVIVSTLLWGVTLAMSIQYLVSPGLQVDKDNVSRCFEGYTHE
EDDDKRVIATTHILIIALFFLVFLLVVICNVLIAHALLAQSPSQPAVSSCRSRGDPGASM
RASRRPHGVKRQALQMLCAVVGVFVLCFLPHHVVQLPWVLAVLEIREGWGSQGWGDNTKQ
YLNDLHQVTLLLMGLNCILDPVVYCFATNKFRSYIKAHLRKMRTGDACSQTGTTQMSMDS
KNQSQRHGEHLQLQGYTANMADES
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcgcaggcacacggagtgaagattcctgccagcagcccgtatcgtttccct
gttttaaacagtctcggccaccatgcgttcagtgtcgactctcaggagctccccacagag
ccatcagtgcagactacgggcaggatggagacaaacacaagcctggacatcaccacaaca
ttctacaactcctctgtcacccaaggaaacagaactttcctggactctgagttccgctac
atgctgtttcctgtgttttatggcatagtgttcatccttggcctgctagccaattgttat
gcgctgttcatactgcggaggctacgccagtccaagaccatgagcgagatccgcatctac
atgatcaacctgaccatggccgaccttctctttgtctgtgctctgcccttatggattggt
tactacagtcgtcatggtgactggatctactctgacttcatgtgccgcgtggcgggcttg
ctgttcttcatcaacacttactgctccatcctcttcctcgccgccatcagcgtcaaccgc
tattgggccatcagccggccgctggccgccgcttccactgaacaccggcgccgtggcgtc
atcgtatcgacgctcttgtggggggtgaccctggccatgtcgatccagtacctggtgtcc
ccaggcctgcaggtagacaaggacaacgtgtctcgctgttttgagggctacacccatgag
gaagatgacgacaaaagggttattgctacaacccacatcctgatcatcgctctcttcttc
cttgtcttcctgctggtggtgatctgtaacgttctgatcgcccacgccctcctggcacag
tcccccagccagcctgctgtctcgtcctgcaggtctaggggtgatcctggagcgtccatg
agggcgtcccgtcgcccccacggggtgaagcggcaggcgctgcagatgctgtgtgcggtg
gtgggggtgtttgtgctgtgcttccttccccaccatgtggtccagctgccctgggtgctg
gcagtgctggagatcagggagggatggggcagccaggggtggggggacaacaccaagcag
tacctcaacgacctccaccaggtcacccttctcctcatgggcctgaactgcattctagac
cctgtagtctactgctttgccaccaataaattccgttcttacatcaaagcccacctgagg
aagatgaggacaggggatgcttgctcccaaacaggcactacccagatgtccatggacagc
aagaaccagagccagaggcatggtgaacacctgcaactccagggttacacagccaacatg
gctgacgagagctga
DBGET
integrated database retrieval system
