Osmerus eperlanus (European smelt): 134026701
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Entry
134026701 CDS
T10927
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134026701 (rtn1a)
03036 Chromosome and associated proteins [BR:
oep03036
]
134026701 (rtn1a)
Membrane trafficking [BR:
oep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
134026701 (rtn1a)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134026701 (rtn1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
134026701
NCBI-ProteinID:
XP_062325581
LinkDB
All DBs
Position
9:16239587..16259528
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AA seq
739 aa
AA seq
DB search
MSSKPSDELGSEGKWFGDDYERNGLFGSTPPRFDELRDEFKPKSGGDTGDLDQQFHQFLD
DGKRPPVAMETASTDDPMSGLFQKPMSDDGDLYTSLLSNQGHRYDQEGSSGSSPSQERST
IDSYGIFSSKMTSDLSDLDDLPKSLLGSEKTESYNYMDISHGDEQSSKRAQPSLGDTGPS
GGDSLGSYMEKNPGGEEESLGPALDSHSFPYVEEPSDEELSDYRSYRTLGTPQTASPVKI
TLTESRPPVAKDDPAPLQTAVSDRDNILSLGLQGVPTVTLSEPEDESPTSSPNASPTEKE
SPSHDMFQFGRGKSAGGDPAPGSTQPSSMAASRDQDGSSAESGDSEIELVSEEPFSRPAA
PSSATSTNNPFEPPPSNKGTFSPAGNPFDSTPPVKGGLGLTGHPAPPSAYSILREEREAE
LDSELFIESASEESPKREQGSAGPKQGAPSPLIPPTTTPSPTPAPARSSPQPAPAEPLAS
SLVKPSNDKSKSPTKMEEDRPSKPKPPTAAVPPEVRPLEDLGGKSQLAGEGRGDQGKPDA
PVLMKGFDKQKAIDLLYWRNVKQSGAVFGSLLLLFFSLTQFSVVSVGAYLALAALSATIS
FRVYKSVLQAVQKTDEGHPFKSYLEVDIALSQEQIGKYAEKALLYVNTCIKELRRLFLVQ
DLVDSLKFAVLMWLLTYVGALFNGLTLMILAVVSMFSMPVVYEKHQAQIDQYVGLIRTQV
NSVVGKIQAKIPGAKRKEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaagcccagtgacgaactaggttcggaggggaaatggttcggggacgattat
gagagaaatggcctgtttggaagtaccccaccccggtttgacgagctacgtgacgaattt
aagccgaaaagcggaggggacacgggcgacctggatcaacaattccatcaatttctggac
gatgggaaaaggcccccagttgctatggaaactgcatctacagatgacccgatgtctgga
ctcttccagaagccaatgagtgacgacggtgacctgtacacctccctgctgtccaatcag
ggccaccggtacgaccaggagggctcctcaggctcctccccctcccaggagcgctccacc
atcgactcctacggcatcttcagctccaagatgacctctgacctgtctgacctggatgac
cttcccaagtccctgctgggttctgagaagaccgagtcctacaactacatggacatcagc
cacggagacgagcagagctccaagcgggcccagcccagcctgggggacacgggcccctcc
ggcggagactccctgggcagctacatggagaagaaccccggaggagaggaggagagcctg
ggcccggcgctggactcgcactccttcccctacgtggaggagccgtcagacgaggagctg
tccgactaccgctcctaccgcaccctgggcaccccgcagacggccagccccgtcaagatc
accctgaccgagtcccgccctcccgtcgccaaggacgacccggccccgctgcagaccgcc
gtgtcagaccgcgacaacatcctcagcctgggcctgcagggcgttcccacggttaccctc
tccgagccggaggacgagagccccacatcctcgcccaacgcgtccccgacagagaaagag
tctccgtctcatgacatgttccagtttggacgagggaagtcagcgggcggcgacccggct
ccaggatccacccagccctcctccatggcagcctccagggaccaggacggcagcagtgcc
gagtccggggactcggagatcgagctggtgtctgaggagcccttctctcgcccagccgcg
ccctcctccgccaccagcaccaacaaccccttcgagccgcccccgagcaacaagggcact
ttcagcccggcgggcaaccccttcgacagcacccccccggttaagggcggcctgggcttg
accggccaccccgccccgccctcggcttacagcatcctgcgggaggagagggaagcagag
ctggacagcgagctctttatcgagtctgcgtctgaggagagcccgaagagagagcagggc
agcgcggggcccaaacagggggccccctcccccctgatcccccccaccaccaccccaagc
cccaccccggccccggcccgcagcagcccacagcccgcccccgccgagccattggctagc
tccctggtgaaaccctccaatgacaagagcaagagccccaccaagatggaggaggatcgt
cccagcaagcccaagccgcccacggctgccgtgccccccgaggtgcgccccctggaggac
ctggggggtaagagccagctggccggcgaggggaggggagaccaggggaagcccgacgct
ccagtcttaatgaagggcttcgacaaacagaaagccattgacctgctctactggaggaat
gtgaagcagtcgggagccgtgttcggcagcctgctgctgctgttcttctccctgacccag
ttcagcgtggtcagcgtgggggcctacttagcgctggccgccctctctgccaccatcagc
ttcagggtctacaagtccgtgctgcaggccgtgcagaagaccgacgaaggccacccattc
aagtcctatctggaggtggacatcgccctgtcccaggagcagatcggtaaatatgctgaa
aaggctctgctgtacgtcaacacctgcattaaggagctccgcaggctgttcctggtccag
gacctggttgactccctcaagtttgccgtgctgatgtggctgctcacctacgtgggagct
ctcttcaacgggctgactctgatgatcctggctgttgtgtccatgttcagcatgcccgtg
gtctatgagaaacaccaggcacagattgaccaatacgtgggattaatacggacccaggtc
aactccgtggtggggaagatccaggcgaagatccctggggccaagcgaaaggaggagtag
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