Osmerus eperlanus (European smelt): 134026870
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Entry
134026870 CDS
T10927
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04137
Mitophagy - animal
oep04140
Autophagy - animal
oep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134026870 (hif1aa)
04137 Mitophagy - animal
134026870 (hif1aa)
04148 Efferocytosis
134026870 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134026870 (hif1aa)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134026870 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
134026870
NCBI-ProteinID:
XP_062325859
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Position
9:complement(16024718..16037900)
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AA seq
781 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQELPLPHSVSSNLDKASIMR
LTISYLRMRKMLNTVEPAEVEESELDCQLNGSYLKALDGFLMVLSDDGDMIYLSDSVNRC
LGLAQFDVTGHSVFDYTHPCDQEELREMLVHRTGSSKKSKEQTTERSFFLRMKCTLTSRG
RTVNVKSATWKVLHCSGHVKLYETPAEQGSCGHKEPPVPFLVLVCDPIPHPSNIEVPLDT
KTFLSRHTLDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQ
VITGQYRMLAKKGGFVWVETQATVIYSSKNSQPQCVVCVNFVLSGIQEEQLILSLEQTGA
VRPVKQELVQEKEVEEETAVEEVEEVVVEEEEEESSSQTDVSLEEPKSPELDVIKMFTQT
VEPSSLTSLYDRLKGKPEALTQLAPAAGDAIIHLDFSCPDIHLQEVPLYNDVMLPSTSEK
LALSPLRPSEPLSPPSLVVPRQEDFPFPVSSAPETSSSPGSNSLERSPAEPDSPLDFCFS
MDSDINSAFKLDLVGKLFAIDTEPKTPFTAQAMDDLDLEMLAPYIPMDDDFQLRTLSPDE
PLSCSPSQHLEGSPLSLAHEVSYPGSPFSAPSRTASPAPPPPETTEHLHLVTKTQRAPQL
DSEISLRTLATHNAQRKRKLDTVTSLSQMMGLGMVLPGLAEQGKKPKVSETCRPETLSHR
TILLLPTDLASRLLGCSSEGSTSPLTLPQLTRDDCEVNAPVLDRQHLLQGEELLRALDQV
I
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtccccgaaaagaaaagggtgagctccgagcgcaggaaggagaag
tctcgcgacgcggcgcgatgccgccgggggaaggagtcggaggtgttctacgaactggcc
caggagctgcccctgcctcacagcgtcagctccaatctggacaaggcctccatcatgagg
ctcaccatcagctacctgcgcatgaggaagatgctcaacacagtcgaaccggctgaagtg
gaggagtcagagctggactgccagctgaacggctcctacctgaaggctctggacggcttc
ctcatggtgctgtcggacgacggagacatgatctatctctccgacagtgtcaacaggtgc
ctgggcctggcacagtttgacgtgacaggacacagtgtgtttgactacacacacccatgt
gaccaggaggagctgagggaaatgctggttcatcgaacaggatcttctaagaagtccaag
gaacaaaccactgagcgcagctttttcctgcgcatgaaatgcaccctcaccagcaggggg
cgcactgtcaatgtcaaatcggcaacatggaaggtgctccactgctcaggccacgtgaag
ctgtacgagaccccagcggagcagggctcgtgtgggcacaaggagccccctgtgcccttc
ctggtgctcgtctgcgaccccatcccccacccctccaacatcgaggtcccactggacacc
aagaccttcctgagccgccacactctcgacatgaagttcacctactgtgacgagaggatc
acagagctgatgggctacgatcccgaggacctgttaaaccgctcagtgtacgaatactat
cacgccctggactcagaccatctcaccaagacccatcacaacttgtttgctaagggccag
gtcatcacaggccagtatcgcatgctggccaagaaaggaggctttgtgtgggtggagaca
caggccacagtcatctacagcagcaagaactcccagccacagtgtgtggtctgtgtcaac
tttgttctcagtggcatccaagaggagcagctgattttgtctttggagcagacaggcgcc
gtcaggcctgtgaagcaggagctcgttcaggagaaggaggtggaggaggagacagctgtc
gaggaggttgaggaggtggtggtggaggaggaggaggaagagagcagcagccagacagat
gtgtctctggaggagcccaaaagccctgagctggacgtgatcaagatgttcacccagact
gtggagccctcgtccctgaccagcctgtacgacaggctgaaggggaagcctgaggccctg
acccagctggccccggctgctggagacgccatcatccacctggacttcagctgccccgac
atccatctgcaggaggttcccctctacaacgatgtgatgctgccctccaccagtgagaag
ctggccctgtcccctctgcgccccagcgagcccctctctcccccctccttagtggtcccc
aggcaggaggacttccccttcccagtgtcctctgctccagagacctccagctcgccaggc
agcaacagcttggaacgcagccccgcagagcccgacagcccgctggacttctgcttctcc
atggactccgatatcaactctgcgtttaagctcgacctggtggggaagctgttcgccatc
gacacggagcccaagactccttttaccgcgcaggccatggatgacctggatctggagatg
ctggccccctacatccccatggatgatgacttccagctgcgcaccctgtccccagatgag
cccctgtcctgcagcccctcccagcacctggagggttcccctctgagcctggctcacgag
gtcagctaccccggctctcccttcagcgctcccagtcgcaccgcctcccctgcaccccca
cccccagagacaacagaacatcttcatcttgtcaccaaaacccagagggccccccagttg
gacagtgagatctccctgagaactctggccacccacaacgcacagcggaagaggaagctg
gacaccgtgacctccctgtcccagatgatggggctgggcatggtgctcccgggcctggct
gagcaggggaagaagcccaaggtgtctgaaacgtgcaggccagagacgctgtcccacagg
accatactgctcctgcctacagaccttgccagccgtctgcttggctgctcatccgagggc
agcacctcccccctaaccctcccccagctcacccgcgacgactgcgaggtcaacgccccc
gttctggaccgccagcatctgctccagggggaggagctgctgcgagctctggaccaagtc
atctga
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