Osmerus eperlanus (European smelt): 134026899
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Entry
134026899 CDS
T10927
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134026899 (msh4)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Meiosis-specific proteins
Others
134026899 (msh4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
134026899
NCBI-ProteinID:
XP_062325919
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All DBs
Position
9:16827795..16836318
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AA seq
923 aa
AA seq
DB search
MLRSSTDEVTPGYSSDSGGSFVSPFGQALSHGHGCETTSSLSPDAASSSSNPPHPAAAQP
GTAAGDAGPTSVLSSQVNRSFRQGRTGKSVPSSGFSSSSFRSGAATPRLRTASGHPARTP
QTEHSGMATCSSATSAVGASVIVAVVEGRGLARGEIGMASINLKCPELILSQFADTGTYA
KVITKLHILVPLELLMPDTASEKGKGTKLYSLITENFQAVAFTAIQRKYFNERKGLEYIQ
QLCAPEFSTVLMEVQAKYYCLAAAAALLKYFEFIQNSIYAPKSLKVIFTGSEQTAMIDSA
SASNLELVVNNRDHRSEHTLLGVLNYTKTPGGGRRLRSNILEPLVDVDTLNIRLDTVQEL
LQNEDLFFGLKNAIGHFLDIDQLLSALVQIPKQETVQVAESKITHVIQLKHTLELIPPLR
MVLKNCDTALLKAYSSSLEDNRFDMILEQVKTVINEDTSYAKGSLTMRTQKCYAVRPDIN
EFLDIARRAYTEIVDDIAALVEQVGEKHSLPTRTSFSSSRGFFMQMKMEGVALPDGKLPA
AFIKVTKQKNNYSFTTADLMKMNDRCDEALREIFHMSYVVVCQLLGTVHEHIHCLYKLSD
AVSMLDMLLSLANACTISDYVRPEFTDTLAIKQGRHPILERIGGQQPVSNNSYISEGSNF
VIITGPNMSGKSTYLKQVALCQIMAQIGSYVPAEYASLRIADQIFTRIGVDDDFETSSST
FMVEMKEVSYIIHNVSDRSLIIIDELGRGTSAEEGVGLCHAVCEFLLRLKAFTLFATHFL
ELCQLETLYPNVENQHMEVQHTRSAEAGTESVVYTYLLSQGCSEERNYGLRAAEMTALPD
SVIQEAKTIASRVSKQLSTKQHTNPETLCQRAVYHLATRLLQTARNSRLDPDSLRIYLRG
LKTRYETELQVMGEAVSMETEEE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaagcagcacagatgaggtgacacctggctacagttcagactccgggggaagc
tttgtgtcacctttcggacaagctttgtctcacggccatggctgtgaaacaacatcttca
ctttctcctgatgctgccagttccagctcaaatcccccgcaccctgcagcagcacagcca
gggactgctgcgggagacgcaggcccaacatcagtcctctccagtcaagtgaatcggagc
ttcaggcaggggcggacgggtaaatccgtcccttcgtccggtttcagcagctcgtccttc
cgctccggagcggccacccccagactaaggacggcaagcggacaccctgcccggacgcca
cagacggaacactctggaatggccacctgctcctctgccacctcggccgtgggcgcctct
gtgattgtggccgtggtggagggacgaggcctggccaggggagagataggcatggctagt
atcaacctcaaatgcccagagctgatcctctctcagttcgcagacacaggaacctacgcc
aaggtcatcaccaagctccatatcttggttcctctggaactcctcatgccagacacagcc
agcgagaaggggaaaggaaccaagctttacagtctcatcacggagaacttccaggcggta
gctttcacggcgattcagaggaaatatttcaacgagagaaaaggtttggagtacattcag
cagctgtgtgcccctgaattcagcactgtgcttatggaggtgcaagctaagtactactgt
ctggctgctgcagccgctctactgaaatactttgagttcattcagaactccatatatgct
cctaagtccctcaaagtgatcttcactggcagtgagcagactgccatgatcgactctgca
tctgcctcaaacctggagcttgtagtcaataacagggaccacaggagtgagcacaccctg
ttaggcgtgctgaactacactaaaactcctggtggaggccgacggctgcgctccaacatc
ctggagcctcttgtggatgttgacaccttaaacatccgtctggacaccgtacaggagctg
ctgcagaacgaggatctcttcttcggcctgaagaacgccattggacattttctggatata
gaccaactgctctctgctctggtccagatccccaagcaggaaacggttcaagtggcagag
tccaagattacacatgtgattcagctgaagcacacactggagttgatcccccctctcagg
atggtgttgaagaactgtgacacggctctgctcaaggcgtacagcagctcattggaagac
aacagatttgacatgatactggagcaggtcaagacggtcataaacgaggacacgagctac
gcgaagggcagcctgaccatgcggactcagaagtgctacgccgttcgccccgacatcaac
gagttcctggacatcgcacggcgagcctacaccgagatcgtggatgacattgcagcgctg
gtggagcaggtgggggagaagcacagcttgccaacgcgcaccagtttcagctcctccaga
gggttcttcatgcagatgaaaatggagggagtggccttgccagatggaaaactcccagca
gcgttcatcaaggtcacaaagcagaagaacaactacagcttcaccacggcagacctgatg
aagatgaacgaccgctgtgatgaggcccttagagagatcttccacatgtcttatgtggtg
gtctgccagctgctgggtactgtccatgagcacatccactgcctctacaagctctctgat
gctgtgtccatgctagacatgctgctgtctctagccaacgcctgcaccatctcagactac
gtgcgtccagaattcacagacaccctggcaatcaagcagggtcgtcaccccatcctggag
cgcatcggcggccagcagcccgtctccaacaacagctacatctccgagggcagcaacttt
gtcatcatcacaggacccaacatgagcggcaagtccacctacctcaaacaggtggcgctc
tgccagatcatggctcagatagggtcctatgtccctgctgagtatgcgtctctacggatc
gctgaccagatcttcaccagaatcggggtggatgacgattttgagaccagctcctccacc
tttatggtggaaatgaaagaggtctcatatataatccacaacgtgagtgacagatccctc
atcatcatagacgagctgggacgtggcaccagtgctgaggagggcgtgggcctctgccac
gctgtctgtgagttcctcctccgcctcaaggccttcactctgtttgccacgcactttctg
gagctctgccaattggagacgttgtatcctaacgttgaaaaccaacacatggaggtccag
cacacacgctccgcagaggccggaacagagagcgtggtctatacctatctactgagtcaa
ggctgctccgaagagaggaactatggtctgagggccgcagagatgacggctctgcctgat
tctgtaattcaagaagcgaagacaatcgcttccagagtcagcaagcagctatcgaccaag
cagcacaccaatccggaaactctttgccaaagagcagtataccacctggccacccgtctc
ctgcagacagccaggaactccagactggacccggacagcctgcgcatctatctgagaggc
ctgaagacacgctatgaaacagagctgcaggtcatgggagaggctgtgtccatggagacg
gaggaggaatga
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