KEGG   Osmerus eperlanus (European smelt): 134026903
Entry
134026903         CDS       T10927                                 
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03013  Nucleocytoplasmic transport
oep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134026903 (thoc7)
  09122 Translation
   03013 Nucleocytoplasmic transport
    134026903 (thoc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oep03019]
    134026903 (thoc7)
   03041 Spliceosome [BR:oep03041]
    134026903 (thoc7)
Messenger RNA biogenesis [BR:oep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     134026903 (thoc7)
Spliceosome [BR:oep03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    134026903 (thoc7)
SSDB
Motif
Pfam: THOC7 OVT1 OSTMP1 Terpene_synth_C TssR_VWA DASH_Dad2 COG6_N Sec8_N KIF21A Peptidase_S10 V_ATPase_I Exonuc_VII_L
Other DBs
NCBI-GeneID: 134026903
NCBI-ProteinID: XP_062325931
LinkDB
Position
1:21366016..21368289
AA seq 203 aa
MGAVTDDEVIRKRLLIDGDGAGDDRRINVLLKSFTKWCNSSGSPEDGFTQYQRMLSTLAQ
CEFSMGKTLLVYDMNLREMENYEKIYTDIEENITSAHEKISECKKEILRAKRIRKNRQEY
DALAKVIQQHPDRHETLKQLEALDKELQQLSHIKENVEDKLELRKKQFHVLLSTIQELQQ
TLENDEKSENYDIQESSPMENGD
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggggctgttacagatgatgaagttatccggaaacgtcttctcattgatggagacgga
gctggagatgaccggcgcatcaatgtactcctaaagagtttcacgaagtggtgcaactca
tctgggtcaccggaggatggatttacacaataccagcggatgttgagcacattggcacag
tgtgaattctcaatgggtaagactttgctggtttatgacatgaacctccgagagatggaa
aactatgagaaaatctacacagacatagaggaaaatatcacatctgcgcatgaaaaaata
tcggagtgcaaaaaagaaatactgagagcaaagcgaatacgaaagaatcggcaagaatat
gatgctctggcaaaggttatccagcagcatccagatcgtcatgaaacgctgaaacagttg
gaggcccttgacaaagaactccagcaactgtcccacatcaaagagaatgtggaggacaag
ttggagttgaggaagaagcagttccacgttctcctcagtaccatccaggaactgcagcaa
acactagagaatgacgagaaatcggagaactatgatattcaggagtcaagtcccatggag
aacggggattga

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