Osmerus eperlanus (European smelt): 134026911
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Entry
134026911 CDS
T10927
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134026911 (exd1)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
134026911 (exd1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
N_formyltrans_C
Motif
Other DBs
NCBI-GeneID:
134026911
NCBI-ProteinID:
XP_062325942
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Position
9:17769477..17773534
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AA seq
667 aa
AA seq
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MTMDDFQFLDSFKRKQIKITLKTATFIGVVQRINLNKTVVLDEVVDVKRGRKFPGVKLFF
GHEILNVEFPHASKSDKGEASEHRAEGHLTVAEFQPYRKNFRLDDDDNEENYVDFVVIEE
FHEKFGPAVMHIRKQQVIGLGADGVGAFQHERLCWLQIATKNKVYLFDILLLGVRAFKNG
LSMILENKHILKVTHDCRSITACLLAQFGVNLTNVFDTQVADVMCFYSESGGSLPDRVST
LQEVVSIHLQMPPSGLASLRIRSQITQEDSEVWYVRPCPVALLKVMALGVVHLLPLRLVL
LDALMADYTGLVDSYLRASQEPVHTQHIGTSCVLELPGELRELEWIRRQRQERALELYPV
TEQGLLQRSNPRAHTPPPAQTPPHPPAPPAQTPPHPPAPPAQTPPHPPAPPAQTPPHPPA
PPAQTPPHLAVPPAQTPPHPPAPPAQTLPHPPAPPAQTLPHRPATPALKPQPTASGLQAP
VDRLQPRDIRTASGLPPVLNPATPALEARQILRKQLSTTSPAAPAGGLGLMEIVLDTMGR
GRPLQSGASPSLPAFPALGQGLCLQAQVPTEGPGGTQKAPVSPGKMAGASPGSRSSLVPS
PPQGGLVQPLVSSTLPGDVPGLGRGGLVQPLVSSTLPGDVPGLGRASLLHSPLTSPLSLS
FRSFRNT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggacgacttccaatttctagacagctttaaaagaaagcaaataaaaataaca
ctcaaaacagcgactttcattggcgtcgtgcagcggataaacctcaacaaaacagtagtt
ttggatgaagttgttgatgtcaagagagggaggaagttccctggtgtgaaacttttcttt
ggacatgaaatactaaatgtggaatttccccatgcatcaaagagtgacaagggggaagcc
agtgaacatagagcagaaggtcacctgaccgtggcagagtttcagccttataggaagaac
ttcagactggatgatgatgataatgaggagaattatgttgactttgtggtcattgaagag
tttcatgagaagtttgggcctgcagtgatgcacatccggaaacaacaggtgattggctta
ggagctgatggagttggggctttccagcatgagagactctgttggttacagatagccacc
aagaacaaagtgtacctgttcgacatcctgttgcttggagttagagctttcaagaatggc
ctttctatgatcctggagaataagcatatcctgaaggtcacccatgactgcaggagcatc
actgcatgtctattggctcagtttggagtcaacctcaccaacgtgtttgacacacaggtg
gcggatgtgatgtgcttctactcagagagcgggggctctctcccggacagggtgagcacc
ctgcaggaagtggtgagcatccacctccagatgcctccctctggcctggcctccctcagg
atcaggtcccagatcacgcaggaggactcggaggtgtggtacgtgcggccctgccccgtg
gccctgctgaaggtcatggctctgggggtggtgcacttactgcctctcaggctggtgctg
ctggacgcgctcatggccgattacacaggcctggtggactcctacctgagagccagccag
gagcctgtccacactcagcacatcggcactagctgtgtgctggagcttcctggggagctg
agggagctggagtggatccgtcggcagcggcaggagagagccctggagctgtaccccgtc
accgagcagggcctgctgcagcgctccaacccccgggcccacacccctcccccagcccag
actccaccacacccccctgcccccccagcccagaccccaccacacccccctgccccccca
gcccagaccccaccacacccccctgcccctccagcccagaccccaccacacccccctgcc
cccccagcccagactccaccacacctcgctgtccctccagctcagaccccaccacacccc
cctgcccctccagcccagaccctaccacacccccctgcccctccagcccagaccctacca
caccgccctgctaccccagccctgaaaccccagcccacagcatcagggctccaggcccca
gtggaccgtctccagcccagagacatccggacagcctctggcctgccccctgtcctgaac
ccagcgaccccagccctggaggccaggcagatcctcaggaaacagctgtccacgaccagc
cctgcggctccagctggaggcctgggcctcatggagatagtcctggacacaatgggcaga
gggaggcccctgcagagtggagcgtcaccctccctgccagccttccctgcccttggacaa
ggcctctgtctccaggcacaagtccccacagagggccctggaggtacccagaaagcccct
gtctctccagggaagatggcaggggcctctcctggctcaagatccagcctggtccccagc
cctccccagggagggctggtccagcccctggtctccagcaccctgcctggggatgtccct
ggcttggggaggggagggctggtccagcccctggtctccagcaccctgcctggggatgtc
cctggcttggggagggcctccctcctccacagtcccctcacctcacctctcagcctgtcc
ttcagatccttcagaaacacctaa
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