Osmerus eperlanus (European smelt): 134027121
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Entry
134027121 CDS
T10927
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04060
Cytokine-cytokine receptor interaction
oep04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134027121 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134027121 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oep04052
]
134027121 (gdf5)
Cytokines and neuropeptides [BR:
oep04052
]
Cytokines
Transforming growth factors (RSTK binding)
134027121 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
134027121
NCBI-ProteinID:
XP_062326271
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Position
1:complement(22057572..22068980)
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AA seq
526 aa
AA seq
DB search
MKVLKRLPLLLGCWTLVYLDLILASLSHTGAAQRAPNSRGEEHTGGAGDRTQLGTGWKSP
NSARITRIRTGPPLIKGEVAKGKPVAFAPASRVVTGSRARGAINLGRKEAARSWVAGDTP
VALNVHLVKTSGIGTPGKNTGKPAARAATPVRNGPNRAVVTQKLSAPAALRSAKLTGKPS
DRDSTKHPLVTPHDYMLSLYWSLSTGEVNTSVLHEAGLANTITSFVDKGQDERQPQLRRQ
KYFFNISSLEKEGLLGAELRILRKRPASDPRKPFPAGGGSDPGSLSLKLFTCASGKQRPT
LLHTRTVEDHGTPRWEVFDIWKLFRSFRNSPQLCLELEAQERGPGGRPVDLRTLGFGRLG
RQTKEKAFFLVFGRTKKRDLFYNEIKARSGHDNKTVYEYLFTQRRMRRAPATRVGKKLPQ
TKPRCHRRQLHVNFKEMGWDDWIIAPLEYEAFHCDGVCDFPIRSHLEPTNHAIIQTLMNS
MDPDSTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctgaaacgtctccctcttttactggggtgctggactctcgtatacctggac
ctcatcctagcgtcactgagccataccggggcggcacagcgtgcgcccaacagccgtggc
gaggagcatacaggcggagcaggtgaccgcactcaactgggaaccggttggaagtctcct
aattctgcgaggatcacgcggattcggacaggacccccgttaatcaagggcgaggtggcc
aaggggaaacctgtggcattcgcgccagcatctcgcgtggtaacgggcagccgcgctcgc
ggggctatcaatttagggcgcaaggaggctgcgcgctcttgggtagccggggatactcca
gtggctctgaacgtgcacctggtcaaaaccagcggcattggcacacccgggaaaaacact
ggaaaacctgcagcaagggcggcaacaccagtacgcaacggaccgaacagagctgtcgtt
acgcaaaagcttagtgctccggcagccctgaggagtgccaaattaacgggcaagcctagc
gacagagactccactaagcaccctctggtgacaccgcacgactacatgctgtcactgtac
tggtcgctgtctaccggggaggtgaacacaagtgtactacatgaggcgggcttggccaac
acgattacgagcttcgtagataaaggacaagatgagcggcagccgcagctgagaaggcag
aagtacttcttcaacatcagctccctggagaaggaggggctcctgggggccgagctccgc
attctcaggaagcgcccggcgtccgacccccgcaaacccttcccggccggtggaggctcg
gaccctggctctctgagcctgaagctgttcacctgcgcttcaggtaaacagaggcccacg
ctgctccacacacgcaccgtggaggaccacggcacgcccaggtgggaggtgtttgacatc
tggaaactgttccggagcttcaggaactccccccagctttgtctggaactggaggcccag
gagagggggccgggggggcggccggtggaccttaggaccctggggttcggccgccttggc
aggcagaccaaggagaaagccttcttcctcgtcttcggtcgtaccaagaaacgcgacctc
ttctacaacgagatcaaggcacggtcgggccacgacaacaagacggtctacgagtacctg
ttcacgcagaggcgcatgcgccgcgccccagccaccagggtcgggaagaagctgccccag
accaagccccggtgtcaccggcgccagctgcacgtcaacttcaaagagatgggctgggac
gactggatcatcgctcctctggaatacgaagcattccactgcgacggcgtgtgcgacttc
cccattcgctcgcacctggaacccaccaatcacgcgatcatacaaaccctcatgaactcc
atggaccccgattccaccccgcccacttgttgcgtgccaacgcgcctcagtccaattagc
atcctctacattgactcagccaacaatgtggtgtacaaacagtatgaggatatggtggtg
gagtcgtgtgggtgcaggtag
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