Osmerus eperlanus (European smelt): 134027693
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Entry
134027693 CDS
T10927
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134027693 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134027693 (dis3l)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
134027693 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_S1
Rrp44_CSD1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
134027693
NCBI-ProteinID:
XP_062326668
LinkDB
All DBs
Position
10:complement(281270..489529)
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AA seq
1045 aa
AA seq
DB search
MIKTEKILHLKSSRGRKVRVVREHYLREHVPCYSTLCQAGCANDGKVLSGEVTHYVVPDA
GVLRDYLEVLEFRELQGIVLTQTACHSVQHSRGRRQYNRLRGLLKDPRYDCVLFANEFQK
YSYCPREKGETQDRWQTRCVYHAAVWYHDHLTGLKPVVMITEDQAALAEYSSLHCGVYVL
STQDYLRTFWPELLAAQELYSSIAQALQERGGEGSEREYVDHLPAEILEAGIKSGRFLQG
TLSVNRHRAQHEAFLRMDASNKNTELNTDVLVCGGKNRNRGVHSDVVVVELLQRSEWMGR
TTALTDQQGEEGSGEEAQSQPMPTGRVVGILQRNWRDYVVTFPPREDSQSQSRTSQRILA
IPWDERIPKIRISTQQAETLQDHRVVVRMDSWESTSLYPSGHMVRVLGRVGELETEVQTI
LIENGIHLAPFSDAQLREMPVSSPERPWQVDPEQEASRRDLRESHLVFSIDPQGCEDVDD
TLSVRSLGRERLELGVHIADVTHFVPEGDLTDLEACARATTYYLADRRYDMLPAVLSADL
CSLLGGVDRYAVSVLWELDSHTLEVQSVWYGRSIIRSCYQLHYELAQSLLEGEGGQVPEL
AQIEPSERDARLARLTQDLETLTRIARHLRARRDKGGALELEGVEVKAQLDEEGNITSLV
PRQPLEVHETVAECMIFANHWVAVKIQESFPQQALLRHHPPPRQQVFSQLIDSAKARGFS
IDTRSNQSLAESLALAQDPQDPQFNRLLRMMATQAMSNALYFCTGTCPRDQYYHYGLALD
RYTHFTSPIRRYADIIVHRLLIAAISLDKGVGPGKPRANNKELEEVAHQINNKNRAAQRA
QKQSTELFQCLYFRDKDPQTDPGCLSDAIVYAIRANGMLVFVPQYGLKGAVYVRSREGLV
LRLRRDGGCEWDSGSVHRYPDHISTSTSSGTSTFQLFNHITVRISVQASRCHSDSLHLEV
VSNKPHQPSQPQPSQPQPSQPQPKGRSQLVQEVLLQAEASQRAQDERAQGPRLSREERQF
CQTARPSLYSVLEEVRELALQTLAL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgattaagacggaaaagattttgcatctcaagagttcccgaggcaggaaagttcgtgtg
gttagggaacattatttgagagagcatgttccttgctacagcactctctgtcaggcgggc
tgtgccaacgatggcaaggtgctttctggagaagtcactcactatgtggtccctgacgcg
ggggttctgcgggattatctggaggtcctggagtttcgagagctccagggaattgttctc
acgcaaaccgcctgccactcggtacaacacagccgcggacgcaggcagtacaaccgcttg
cgcgggctcttgaaggacccccgctacgactgtgtgctgtttgctaacgagttccagaag
tactcctactgccccagggagaagggggagacacaggacaggtggcagaccaggtgtgtg
taccatgcagcggtgtggtaccatgaccacctgactggtctaaagccggtcgtaatgatc
actgaggaccaggctgcactggcggagtacagcagcctccactgtggggtgtacgtcctc
tccacacaggactacctcaggaccttctggccggagttgctggcggcccaggagctgtac
agctcgatcgcccaggcgctgcaggagagagggggcgagggctctgagagggagtacgtc
gaccacctgcctgctgagatcctggaggctggcatcaagtctggaagattcctccaggga
acgctgagtgtgaacaggcatagagctcagcacgaggccttcctgaggatggacgcctcc
aacaagaacacagagctgaatacggacgtgttggtgtgtggaggtaagaaccgtaaccga
ggtgtgcatagcgacgtggtagttgtggaactgttgcagaggagtgagtggatggggagg
acaactgccctgacggaccagcagggggaagaggggagcggagaagaagcccagagccag
cccatgccgacaggaagagtggtggggatcctccagaggaactggagggactacgtggtg
acctttcccccccgggaggatagccaatcacagagcaggacctcccagcgtatcctggcg
atcccttgggatgaacgcatccccaagatcaggatcagcacccagcaggccgagacactg
caggaccacagggtggtggtgcgtatggactcatgggagagcacatccctgtaccccagc
ggtcacatggtgcgggtcctggggcgagtgggggagctagagacagaggttcagaccatc
ctgatagagaacggcatccacctggcccccttctccgatgcccagctgcgggagatgccg
gtcagttctccggagcgtccctggcaggtggacccagagcaggaagcttccagacgggac
ctgcgggagtctcatctggtgttcagcatcgacccgcagggctgcgaggatgtggacgac
actctgtcagtgcgcagcctggggcgagagaggctggagctgggggtccacatcgctgac
gtcacacacttcgtacccgagggggacctcaccgatctggaggcatgcgccagagccacc
acctactacctggcagaccgcaggtatgacatgcttcctgcggtgctgagtgcagatctg
tgctccctgctgggaggggttgacaggtatgcggtcagcgtgctgtgggagctggactct
cacaccctggaggtgcagagcgtgtggtacggccgtagcatcatccgctcctgctaccag
ctccactatgagctggcccaaagcctgctggagggggagggcggtcaggtaccggagctg
gcccagattgagccctcagagagggacgccagactagcccggctcacccaggacctggag
accctgacccgcatagccaggcacctccgtgctcgcagggacaaggggggggctctggag
ctggagggggtggaggtgaaggcccagctggacgaggaggggaacatcacgtccctggta
ccccgccagcccctcgaggtgcatgagaccgtggctgagtgcatgatcttcgccaaccac
tgggtggcggttaagatccaggagagcttcccccagcaggccctgctgaggcaccacccg
cccccacgccagcaggtcttcagccagctgatcgacagcgccaaggccaggggcttcagc
atcgacaccaggtccaaccagagcctggctgagtccctggccctggcccaggacccccag
gaccctcagttcaaccgcctgctgaggatgatggccacgcaagccatgtccaacgctctg
tacttctgcactggaacctgccctcgggaccagtactatcactatggtcttgctttggac
cggtacacccacttcacttcccctatccgtcgttatgccgacataattgtccaccgattg
cttatcgctgcaatcagtctggacaagggggtggggcctggaaaaccccgggccaataac
aaggagctagaggaagtggctcatcaaatcaacaacaagaacagagcagcacagcgggcc
cagaagcagtccacagagctgttccagtgtctgtacttcagagacaaggaccctcagaca
gacccaggctgcctctccgacgccatcgtctacgccatcagagccaacggcatgctggtc
ttcgtgccccaatatggcctgaagggggcggtgtacgtgaggagccgcgagggcctggtg
ttgaggctgaggagagatggaggctgtgagtgggacagtggctcggtccaccgctaccct
gaccacatctccacctccacctcctccggtacctccaccttccagctgttcaaccacatc
accgtccgcatctcagtccaggcttcacgctgccactcagacagcctccacctggaagtg
gttagcaataagccccaccagccctcccagccccagccctcccagccccagccctcccag
ccccagcccaaggggcgctcccagctggtccaggaggtgctcctccaggcggaggcgtcc
cagcgggcccaggacgagcgagctcagggcccccggctttccagggaggagaggcagttc
tgccagacggcccgtcccagcctgtactccgtcctggaggaggtccgggagctggctctg
cagaccctcgccctgtag
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