Osmerus eperlanus (European smelt): 134028066
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Entry
134028066 CDS
T10927
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oep00535
]
134028066
00536 Glycosaminoglycan binding proteins [BR:
oep00536
]
134028066
04091 Lectins [BR:
oep04091
]
134028066
Proteoglycans [BR:
oep00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
134028066
Glycosaminoglycan binding proteins [BR:
oep00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
134028066
Lectins [BR:
oep04091
]
C-Type lectins
Lecticans
134028066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
Sushi
V-set
hEGF
EGF_3
EGF_TEN
I-set
Motif
Other DBs
NCBI-GeneID:
134028066
NCBI-ProteinID:
XP_062327376
LinkDB
All DBs
Position
10:11925866..11939049
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AA seq
1476 aa
AA seq
DB search
MNKWILLLSVCLHVGSATFDLPSFSYEEHSFLDPEDVLSVSIPLERPQRPLLGSTLVLPC
YFQDHTVNDPGAPTIAPLSHRIKWSHVTKDKVSVILVAMEGKIQVEDKYLDRVHMVGYPM
TPTDASIKITELHSNDSGAYRCEVQHGIEDSHDTVQVQVQGIVFHYRAITTRYSLTFEKA
KAACIQNSAVIASPEQLQAAYDDGFHQCDAGWLSDQTVRYPIHDPRRNCYGDKEELPGVR
TYGVRDVNETYDVYCFAEKMTGRVFYSGSVAKFTYAEAEEQCSNLDAQLATTGQLYLAWQ
AGLDVCNAGWLGDRSVRYPINIARAQCGGGLLGVRTVYLHSNQTGYPKPESRYDAFCFTE
SPDEDSSGSGMLTVTTVTESPGVFLKKTTTESEALGELVTQRPTSPDFAYTTELPLPEPP
SVTEVISEEVERATARPDVGAEICRENGPCYVLPPTGVVFLYRAASKRYSFTFVEAQRAC
QSVGASIATPEQLQAAYQAGYHQCDAGWLLDQTVRYPIVSPREKCAGDLEHLPGVRSYGL
RPADERYDAYCYIDKLKGEVFHAGSGDGFTYDEALAHCQEQNASLASTGELYAAWRLGFD
KCRAGWLLDHSVRYSINKPRAQCGAGRAGVHTVYAHPNQTAYPALDARYDAYCFRVDILL
LANETGMNITEIEEALINRTSTTDLLRPVLPSIAPPISVEQFGSGSGASGASGSSGDHSG
DLSGDHSGVLTGSGDMSGSGDSSGSGRSDIPSGASGLTSGELSGSGLSGELSGSGLSGEL
SGSGLTGELSGSGLSGELSGSGLSGDGSVIDVVLSGGGAVLSGEGSGSAGPQEAGEGSTG
ILTFPSGIGSGMISGSGYLWGSGSGSGLISGSSGEFSGMSSGSGSSAIAEFSGYSGFPSG
VYPSGTSGLSGDESGSGDTVIMLIDGQLLEVSTSQTGREKELGKGGLEFSGSGDSSGDIS
GSGGMASADLSGSSSGSGSGFFSGVTFLGSGFTDLTGSSSGEQEASGFLHYGSGGGSGGS
GSGASGLPSGAASGIFGSGSSASGEEEIIIFTTGDVLTEVSTRTSVSMELGKGPVEISGE
GSTSNNFHSGSGETYPTPASGVYSGAHSGDIPLVTLSSTSDDKALTGGTVGPEEALAGAE
LVENYGQVYVTFSPVLAPAGLAAAATTASAVSLPTPAVMEEPASVLVDPNPCDPNPCGAG
SCSVQDGVGLCHCPPGLGGVGCQYEVDVCHSNPCDNGATCVEIVDSYKCLCLPSYGGDRC
EIDEQHCEEGWTKFQGNCYLHFSERETWPEAEQRCRDLNAHLVSIITPEEQHFVNSNAQD
YQWIGLNDMTMENDFRWTDGTPLQYENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPCN
YHLPFTCKAGPVSCGSPPVVENARMFGNRKELYPVNSIIRYQCNPGFMQRHLPVVRCLAD
GQWEKPQVECINLAFSNRIQRRTTRSRSESASKQLH
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtggatattactattatctgtgtgtctgcacgttggctcagcaacattcgac
ctaccatcattttcatatgaagagcactcattcctagaccctgaggatgttctgagtgtc
agcatccctctggaacgcccacagcgccctctactgggcagcaccttggtgcttccctgc
tacttccaggaccacacggtcaatgacccgggagcccccaccatagcccccctctcccac
cgcataaaatggagccacgtcaccaaagacaaggtgtcagtcatcctggtcgctatggaa
ggaaaaatacaggtagaggacaagtacctggacagggttcacatggtgggatacccaatg
acccccacagacgctagcattaagatcacagagctgcactccaatgattcgggcgcctac
cgctgtgaggtccagcatggcatcgaggacagccatgacacagtccaagttcaggtccaa
ggcattgtgttccactatcgtgctatcactacccgctactctctgacctttgagaaggcg
aaggcagcatgtattcagaacagtgctgtcattgcctcccctgaacagctgcaggctgcc
tacgatgatggctttcaccagtgtgatgcaggctggctctctgaccagactgtcaggtac
cccatccatgaccctcgacggaactgctacggtgataaagaggagttaccgggggtgagg
acctacggagtaagagatgtcaacgagacctatgacgtgtactgtttcgctgagaagatg
acaggcagggtgttctactctgggtctgtggctaaattcacctacgctgaggctgaggag
cagtgttcaaatctggatgcccagttggccacgaccggccagctctacctggcatggcag
gctggtttggatgtctgcaacgcaggctggctgggggacagaagcgtccgctaccctatc
aacatcgcccgggcgcagtgcggaggcggactgctgggcgtgaggaccgtgtacctgcat
tccaaccagacaggataccccaagccagagtctcgatatgatgccttctgcttcacagaa
tccccagatgaggacagctcaggaagtggcatgctgactgtcaccacggtaaccgagagc
cccggggtgttcctcaagaagaccaccactgaaagcgaggcactgggagaactggtcact
cagaggcccactagtcccgacttcgcctacaccactgagctgcccctgccggagcccccc
agcgtcacagaggtcatctctgaggaggtggagagagccactgccaggccagacgtcggg
gcagagatctgcagagagaatgggccgtgctatgtgctgccccctacaggtgtggtgttc
ctctaccgcgctgcctccaaacgctactccttcacctttgtggaggcccagcgggcgtgt
cagagtgtcggagcctccatcgcaaccccagagcagctgcaggcagcctaccaggcaggg
taccaccagtgtgatgctggttggctgctggatcagactgtcaggtatcccatcgtgtct
ccgagggagaagtgtgctggagacctggagcacctgccgggcgtgaggtcttatggcctg
aggcccgcagatgagcgatacgatgcgtactgctacatcgataagctcaagggtgaggtg
ttccatgcagggtctggtgatggttttacctacgacgaggccctggcccactgccaggag
cagaacgcctctctggcctccactggagagctctacgctgcctggaggctgggcttcgac
aagtgccgtgctggctggctcctggaccatagcgtccgctactccatcaataagccccgg
gcccagtgtggtgcagggagggctggggtacacacagtctatgcccatcccaaccagact
gcctacccagctctggatgccagatatgatgcctactgtttcagagtggacatcttactt
ctggccaatgaaactggaatgaacatcacagaaatagaagaagctctgattaaccgtaca
tcaacaactgatttactgagaccagtcctcccctccatcgctcctcccatctctgtagag
cagttcggttctggttctggggcatctggtgccagtggatcttcaggcgatcattctgga
gatttatcaggggaccattctggtgttctgaccgggtctggagacatgtccggttctggt
gactcctctggcagtgggaggtctgacattcccagtggagcgtctggcctgaccagcgga
gagctgtctggttccgggctcagcggagagctgtctggttccgggctcagcggagagctg
tctggttcagggctcaccggagagctgtctggttccgggctcagcggagagctgtctggt
tccgggctcagcggagacggttctgtgatagacgtggttctctcaggaggcggtgctgtc
ctgtctggggagggctctggatctgctggccctcaggaggcaggggaaggaagcactggg
atcctgaccttcccctctgggataggctcagggatgatcagtggcagtggttacctgtgg
ggatccggcagtggctctggcctcatctcaggcagctcaggggagttttccggaatgtct
tctggatccggctcaagtgccattgcggagttttctggatacagtggttttccatctggg
gtctatccctcaggaaccagtggcttgtccggggatgaatcaggcagtggagatactgtg
atcatgctgatcgatggtcaactgttggaggtgtccacctcacaaactggcagggagaag
gagctagggaagggcggcctggagttcagcggctctggggacagctctggggacatctcg
gggtccggcgggatggcgagcgctgacctcagtggctcatcctccgggagtggctcaggg
ttcttctcaggggtgaccttcttggggtcagggttcaccgacctcacagggtcatcctca
ggagagcaggaggcatctgggttcttacattatggttctggaggagggagtggagggtct
gggtctggagcttcaggcctcccctccggggccgcatcagggatctttggatctggctcc
tctgccagcggagaggaagaaatcattatcttcacaaccggtgatgtcctgactgaggtg
tccaccaggacatcggtctccatggagctggggaaggggcccgtggaaatcagtggggag
ggaagcaccagcaacaactttcattcaggcagcggggagacctacccaaccccagccagc
ggagtctactctggggctcactctggagacatccccctggtgacgctgtcctccacttcc
gatgacaaggcactgactgggggcacagtaggaccagaagaggccttggctggagctgag
ctggtggagaactatgggcaggtctatgtgaccttcagccctgtcctggctcctgcaggt
ctagctgctgctgccacgacagcctctgctgtctccttgccgactcctgctgtgatggaa
gaacccgcgtcagtcctggttgatccaaacccatgtgaccccaacccgtgtggtgctggg
tcatgctcagtacaggatggggtgggtctgtgccactgtcctcctgggctgggaggagtg
gggtgccagtatgaggttgatgtgtgccattccaacccttgcgacaatggagcaacctgt
gtggaaattgtggactcttacaaatgcttatgcctgcccagctacggaggggaccgctgt
gagatcgatgagcagcactgtgaggagggatggactaagtttcaggggaactgttacctg
cacttctctgagagggagacctggccagaggcagaacagcgatgcagggacctcaatgca
cacctggtcagcatcatcacccctgaggaacagcactttgtcaactctaatgctcaggac
taccagtggatcggcctgaatgacatgacaatggagaatgatttccgctggacagatgga
acccctctgcaatatgagaactggaggccgaaccagcctgacaactacttcaactctgga
gaggactgtgttgtgatgatatggcatgagaacggccagtggaatgatgtcccctgcaac
taccacttgcccttcacctgcaaggctggcccagtgtcatgtgggtctccgcccgtggtg
gagaatgccaggatgtttggcaacaggaaggagctgtacccagtcaactccatcatccgc
taccagtgtaacccaggcttcatgcagcgtcacctgcctgtggtccgctgcttggcagac
ggacagtgggagaaaccccaggtggaatgtatcaacttagcattcagcaacagaatacag
aggagaaccaccaggagtcgatcagaatcagccagcaagcagcttcattaa
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