Osmerus eperlanus (European smelt): 134028079
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Entry
134028079 CDS
T10927
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134028079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oep03021
]
134028079
03036 Chromosome and associated proteins [BR:
oep03036
]
134028079
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134028079
Coactivators
SAGA/TFTC/STAGA complex
134028079
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
134028079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
134028079
NCBI-ProteinID:
XP_062327394
LinkDB
All DBs
Position
10:6245038..6296643
Genome browser
AA seq
994 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVGQSNPAGSHSEKRGVGSTGNANHHLGK
TPPAQVGTTLEQQQQQGQHKSDMHQETNSKEIGAEKTITSSSPSSVPSFGEASSTSGTSV
DASSSGLQSHGTSITTQPASGVATLPSPLVSISTASSRRSTLDSDETSTDTDSPRKRITA
SLRSASARIQTLNGNAVTSKRNSNTARTESVSAVASGATGDNSCRTVTACVNTTTFTVSH
SSITAGQTAIALDRGTPTIALHRLPSHIVASIAQNGNGTTVSALVEQGARIGPIGSAATF
QANYNKEGTDTGASKQDSLAQSKTVVSSQSGAVNSVINAVSTPSPVFNPSTSQTTVATPV
TLTGMSKTSTSVAGQIITTSAGMVRPTTPSAAPAVATPTQPQLRPGLSAPQRIVAPQLIV
RPPQQQTTIQLPPGFTIPQGMVLVRTEMGQLVMVPQQALAQAQAQAQAQNNISPRPATPT
AGTTFRVTTPQKGPVAPAVAVTAPQQAPAVLPPQAQAASQPALPPQTTNAPTGPGAAAVS
QEMQENVKKCKNFLATLIKLASHNSPSPDTSRNVKALVQDLLDAKIEPEEFTNRLQLELK
SSPQPYLVPFLKKSLPALRLSLLSSQHSLTQPPQQQKPPPTASMPAIVAGPAVRVRQPNS
IAATGAGALPVGHTAALGVKRAGTAGSQVQMPLVITQTRGLMGKGATIQAGRSPGGFAVQ
GLGNQKNKLNDPGGGTFRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCKDEA
FLHPGLLHKRILETAKKYGVSEVPLEAATFISHATQSRLRTVLEKVSAIAQHRLDACKDD
DWYEQSGEVRSQLKFFEHLERMEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEM
QQQELAQMRQRDANLTALAAIGPRKKRKMDSPGSTPSGAEVSSSSAGSPAGASTSSRQYA
RQRITRVNLRDLIFYMEQERDTAHSLLLYRALLK
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggacgaaaaagct
gtgagcgatctggtgggttctctagagtcacagcttgttggccaaagcaacccagcaggt
tcccattcggagaaaagaggcgttgggtctacaggcaatgcaaaccaccacttaggaaaa
acgccacctgcccaagtgggcactacactagaacagcaacaacaacaaggacaacataaa
tctgatatgcaccaggagacgaactctaaagaaatcggcgccgaaaaaacaattacatcc
tcatcaccaagttccgttccgtcctttggcgaggcttccagcacctcaggcaccagtgta
gacgctagctcgagcggtttgcaatcacatggaacatccatcacaacacagcctgcatct
ggtgtggcaactttgccatcaccgctagtcagcatcagcaccgccagttctaggagatct
actttggactccgatgagacgtcaacagacaccgattcaccaagaaaacgcataactgcc
tcactaaggagtgcttctgctcgaatacagactttgaacggtaacgcagtaacgtcaaag
aggaatagcaatacagctagaacggaaagtgttagcgcagtggctagcggggcaactggc
gataactcatgtcggaccgttacagcttgtgtaaatacaacgactttcactgtatctcac
tccagcatcacagcaggtcaaacagcgattgctttagatagagggactcctactattgca
ttgcatagactccctagtcacattgtagctagcatagcacagaatggaaatggcacgacc
gtatcggccttggtcgagcaaggcgcacggataggacctatcggctctgcagcaactttc
caagcgaattacaataaagagggaaccgacacaggtgcttcgaaacaggattctcttgcg
cagtccaaaactgttgtgtccagtcagtctggtgctgttaattctgtaataaatgctgta
tccactccgtctcctgtcttcaacccatccacaagccagactactgttgctactcctgta
acacttacggggatgtcaaaaacttcaacaagtgtggcagggcaaattatcacgacatcc
gcaggaatggttaggcccacaacaccctcagcggcacctgcagtggcaaccccgacacag
ccccagcttcgacctggactctctgcgcctcaaaggattgtagctccccagctgattgtc
aggcctcctcagcagcagacgaccattcagctgccccctgggtttaccatcccacaggga
atggtgttggtgcgcactgagatgggccagctggtcatggttccccagcaggccctagcc
caggcccaggcacaggcccaggcccaaaacaacatctccccacgacctgccacccccacg
gcgggaactaccttcagagtgaccaccccacagaagggccccgtggcgccagccgtggcg
gtgacggctcctcagcaggcccctgcagtcctgcccccccaggcccaggccgcctcgcag
ccagccctgcccccgcagaccaccaacgctccgacgggccccggagccgctgccgtctcc
caggagatgcaggaaaacgtgaagaaatgtaagaacttcctggccacgctcatcaaactg
gcgtctcacaactctccttctcctgacacttcacgtaatgtgaaggccctcgtgcaggac
ctactggatgctaagatcgaaccagaggagttcaccaaccggctacagctggagctcaag
tcatccccccagccttacctggtgcccttcctgaagaagagtctcccagccctgcggttg
tctctgctcagcagtcagcattccctgacccagcctccccagcagcagaaacccccgccc
acagcttccatgccagccatcgttgctgggccagctgtccgtgtgcgccagcccaacagc
atagccgctaccggggccggggcgctacccgtcggacacacagctgccctgggtgtcaag
cgagcgggcactgctggcagccaagtccagatgcccttggtgatcacacagacacgaggc
ttgatggggaagggagccacgatacaggcgggcaggagtcccgggggctttgccgttcag
gggttggggaatcagaaaaacaagctcaacgatcctggaggcggtactttcagggacgat
gatgacatcaatgacgtggcgtccatggccggggtgaacctgaacgaggagagcgctcgt
attctggcaaccaactccgagctggtgggcactcagatccgctcctgtaaggacgaggcc
ttcctccacccaggtctgctgcacaaacgcatcctggagacagctaagaagtatggagtc
agtgaagttcctctggaggctgccaccttcatctctcacgccactcagtctcgtctgcgc
accgttctggagaaggtgtccgctatcgcacagcacagactggatgcttgtaaagatgac
gactggtacgagcagtcaggagaagtacggtcgcagcttaagttctttgaacatctggag
aggatggagaagcagaggaaagatgagcaggagagagaaattctgctgaaggcagccaaa
agtcgctccaggcaagaggacccagagcaggctcgcttgaaacagaaagctaaggagatg
cagcaacaggagctggctcagatgaggcagagagacgccaacctgacagctctagccgcc
atcggaccacgcaagaaacgcaagatggactctccgggctccacgccatcaggggcagag
gtgtccagcagctccgcagggtcaccggccggtgcctccacctcatcacgccagtacgcc
cgccaacgcatcacccgcgtcaacctcagggatttgatcttctacatggagcaggagcgg
gacactgcccactcactactgctctaccgcgcccttctgaagtag
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