Osmerus eperlanus (European smelt): 134028099
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Entry
134028099 CDS
T10927
Symbol
irx5a
Name
(RefSeq) Iroquois homeobox protein 5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134028099 (irx5a)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134028099 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
134028099
NCBI-ProteinID:
XP_062327436
LinkDB
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Position
10:complement(5258238..5261659)
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AA seq
448 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVGSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTESDHKLLNPGDIACDRFKEETHGKEM
DPLLSDSELKDQEGRTELLPESAKPTTSSPSAVPRGNELVAQEKPSEMNHVPGTVHSNVT
SVIHSPQSAPKPKLWSLAEIATSSDRCKGNNEVPQAPGMGQSTVIATNAASPSRSSPQCP
LPNSTVLSRPIYYTSPFYPGYTNYGGFGHLHSNHSSGTGSTAHFNGLNQTVLNRAEALVR
ESQKVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccgtccgcttctttggcactgtattcgtgc
ccggcgtacagtacaagcgttatctcgggacccaggaccgaggaacttggaagatcttct
tcgggctcggcttttgctccatatgccggatctactgcgttcaccagcgcttcgcccggg
tacaactcccatctcccgtacagtgcagacgcggcggcggctgccacattcacttcttac
gtgggttcgccatatgaccataccacgggaatggctgggtctataggataccatccctac
gcagctcccttgggctcatatccttacggtgacccagcataccgaaagaatgcaacacgg
gacgccactgccaccctcaaagcctggctaaacgagcaccgtaagaacccctaccccacc
aagggggagaaaatcatgctggccatcatcaccaaaatgaccctcacccaagtgtccacc
tggttcgccaacgccaggaggagactaaagaaggagaacaagatgacctggactccccgg
aaccgcagtgaggatgaggaagaggatgagaacattgatctggagaaaaacgacgacgat
gaacctaacaagccaacagacaagggagactcgacagacacagagtcagatcataaattg
ctgaaccccggggacatagcgtgcgatagatttaaggaagagacccatggaaaagaaatg
gatcccctcctgagcgactcggaattaaaagaccaggaggggcggacagagttactgccc
gagtctgcaaaacccaccacctccagtccatcggcagtgcctcgggggaacgagctcgtt
gcgcaagagaagccgtcagaaatgaaccatgtgccgggcacagtacacagcaatgtaacg
tctgttattcattcgcctcagtcggcccctaaaccaaaactctggtctctagcagagatc
gccacgtcctcagacaggtgtaagggcaacaatgaggtgccacaggccccggggatgggt
cagagcacagtaatcgccaccaacgcagcgtcgccatcacgttcctccccccagtgccct
ctcccgaacagcactgtcttatcaaggcctatctactatacatcccctttttacccgggg
tacacgaactatggcggttttggacatcttcacagcaaccacagctccggcacgggctct
acggcacattttaacggattaaaccagactgtgttaaatagagcagaggctttggtaaga
gaaagccagaaagtcagaggccaaacgcaggtagatctttgtaaagactccccttatgaa
ctaaagaaaggtatgtcaaacatttaa
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