KEGG   Osmerus eperlanus (European smelt): 134028287
Entry
134028287         CDS       T10927                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oep00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    134028287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oep03019]
    134028287
   03036 Chromosome and associated proteins [BR:oep03036]
    134028287
Messenger RNA biogenesis [BR:oep03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     134028287
Chromosome and associated proteins [BR:oep03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     134028287
    COMPASS/SET1 complex (yeast)
     134028287
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_NOL10_N DSE1_N Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_TEP1_C NBCH_WD40 Beta-prop_ACSF4 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Tricorn_2nd PAC11 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_HPS5 PROPPIN MinC_C
Other DBs
NCBI-GeneID: 134028287
NCBI-ProteinID: XP_062327747
LinkDB
Position
1:24007637..24010839
AA seq 314 aa
MKINDRVLRSFRVARIYREHSEKVNCVDYSPNGESAVSSSDDDSIVLYDCREGKPTRTLY
SKKYGVDLIRYTNRDADTVVYSSNKLDDTIRYLSLTDNKYIRYFPGHTARVVALSVSPVD
DKFISGSLDNTIRLWDLRSPNCQGLTNPLGKPVCCFDPEGLIFAAGVNSEMINLYDIRLF
DKGPFSSFETQFSRVCEWTGLKFSKDGKQILISSNGGAIRVLDAFDGSVLHTFSGYNNTK
GISLEACFTPDSKFVMIGSEDGRIHIWSTESGMKIAVLDGKHSGPINTLQFNPKYMTFAS
ACTNMAFWLPCVND
NT seq 945 nt   +upstreamnt  +downstreamnt
atgaagattaacgaccgtgtgttgcgaagctttagagttgcaaggatataccgggaacat
tcagaaaaagtcaactgtgtggattacagccccaatggcgaaagtgcagtatccagcagt
gatgatgattccattgtgttgtatgactgtcgcgagggaaaacctactcggactctttac
agcaagaagtatggagtggacctcattcgctatacgaacagggatgccgacacagtcgtg
tacagctctaataaactcgacgataccatccgatacctctcccttacggacaacaagtac
atccgctatttccctggccacactgcaagggtagttgctctctccgtatcaccagtggat
gataaattcatctctgggtccttggataacaccatcaggctctgggatctgcgctctccc
aactgtcaaggcttgactaatcctttagggaagcctgtatgctgcttcgatccagagggg
ctgatatttgctgccggggtgaactcagagatgattaacttgtatgacattcgcttattt
gataagggtcccttttcttcctttgagacccagttcagtcgtgtttgtgagtggactggg
ttgaagttcagtaaggatggtaaacagatccttatatcctccaacgggggcgccatccgc
gtcctcgatgccttcgacggctccgtgctgcacactttctctggctacaacaacacgaag
ggcatctctctcgaggcttgtttcaccccagactctaagtttgttatgattggttcagaa
gacggccggatccacatatggagcacagagagtgggatgaagatagcggtcttggatggg
aaacactcagggcctatcaacacactgcagtttaacccaaaatacatgaccttcgcaagt
gcctgcaccaacatggcattttggctcccatgtgtcaatgactga

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