Osmerus eperlanus (European smelt): 134028317
Help
Entry
134028317 CDS
T10927
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
134028317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134028317
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
134028317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans_2
Ion_trans
Motif
Other DBs
NCBI-GeneID:
134028317
NCBI-ProteinID:
XP_062327783
LinkDB
All DBs
Position
10:complement(10486502..10492417)
Genome browser
AA seq
818 aa
AA seq
DB search
MERKTLTSVKLCRLGAVLVGTLFFYAGLIHLVESSGDPWLENSNASSRPYFLFVYFLTVT
MSTVGYGDVLVYTASGQFLITVFIFIYLAMFASFIPQVKEILANRKRFNGEYSVVLGKSH
VVVCGHLSLSNIEPFVREFFHDDRGEVNTDLLFLGDFCPDATLEDFFVSLSGQINFYQGL
VKTRQDQERVKMRDAAACVILCDRFAADPDAQDSDTLMNVITVKTYHPKTRVIVQMLKPS
SKVLVQKIPDWDWNSGDAALCPMELKLGFMAQSCRVPGLSSLLANLFTMQSEVEQKGDSW
KNFYREGMYNEIYTEHLSWPFRGMSFAQASKLCFLKLGLLLIGIATYSEDNEMSVLVNPP
DCIKIKRGTLGFLVASDASDARRASIYCERCHSRVRRLCRMRPCECPEFDEDGSLTSAMN
LRRPSLGVLPVISDLVENGDWTKEMELEGQVTLDSTGMFHWCPPVSLEAVTLTRHSAIAL
ALQKHVVACVFGDRGSRLQSLRAFMMPLRASSLTSPELPTVIFLGDRDYFLREWHDIHYF
PNIYFLPGSPLCLDDLLAVGVTRCSRTVILTSTGSTEDTQTLLSCFTLDSLSLQTEAPTT
LSPSSNTQGLDPQNTTGHSVPLLAELGNTLNVKLMNDTDGLEEEDSFPLTEDFSVGKVFS
VDVLDSLMAATYFNSNVPLLVSTLVTGGDTPLLEAQFVRDNKLKGGVMTPQLWALRRRSK
LAQLALQEQPLCHLQCVLYRDLFVQALDSLEILCFGLYRLVDPPNRFMKRFVITNPRSDL
PLLASDQVFCSVPFHQSHLLTQSPPLNLHQTPHDSSIL
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggaacgaaagaccttaacatctgtgaagctgtgtcggctgggagctgtcctcgtggga
accctgtttttttacgccggcctcatccatctggtggagagctctggggacccctggctt
gagaactccaacgcctcgagccgtccatacttcctgtttgtgtacttcctaacagtgacc
atgtccacggtgggctatggcgacgtcctagtctacaccgcgtcaggacaatttttaatc
accgtgttcatcttcatctacctggcgatgtttgcaagcttcattccccaggtgaaggag
atcctagcaaacagaaagcgcttcaatggggaatactccgttgtcttggggaaatcgcat
gtggttgtatgtggacatctttccctgagcaacattgagccgtttgtgagggagttcttc
catgacgaccggggagaggttaacaccgacctcctcttcctgggggacttttgccctgac
gctacgctggaggatttttttgtgagtctctctgggcaaatcaacttttatcagggcttg
gtgaagaccagacaggaccaggagagagtcaagatgcgcgacgcggccgcctgtgtgatc
ctctgtgaccgctttgctgccgacccagatgcacaggactcggacacactgatgaatgtg
atcaccgtcaagacctatcatcccaaaaccagggtgatcgtccaaatgttgaagcccagc
agcaaggtcctggtgcagaagattccggactgggactggaattctggcgatgcagcgttg
tgtcccatggagctgaagctggggttcatggcgcagagttgtcgtgtgccaggactgtcc
agcttgctcgcaaatctgttcacaatgcagagtgaggtggaacagaagggagactcgtgg
aagaacttctacagagagggcatgtacaatgagatctacacagagcacctctcctggcct
tttagaggcatgtccttcgcccaagccagcaagctctgcttcctgaagctgggcctgctg
ctcatcggcatagcaacctacagcgaagacaacgagatgagtgttctggtgaatcctccg
gactgcatcaaaatcaaacgggggactctgggcttcctggtggccagcgatgcaagcgat
gccaggagggccagcatctactgtgagaggtgtcacagccgggttagaaggctgtgcagg
atgagaccgtgcgagtgtcctgagtttgatgaggacggctctctaacctctgccatgaat
ttacgacgcccatctctgggagtacttccggtcatttctgatctcgtggagaacggtgac
tggaccaaggagatggagctggagggtcaggtgacgctcgactccaccggaatgttccac
tggtgtccccctgtctccctggaagctgttaccctgaccagacacagtgccattgccctg
gccctccagaagcacgtggtggcctgtgtgtttggggaccgtggctccagactgcagagc
ctgcgggccttcatgatgcctctgagagccagcagcctgaccagccctgaactgcccacc
gtgatcttcctgggggacagagactacttcctgagggagtggcacgacatccactacttc
cctaacatctatttcctgcctggctctcctctgtgtctagacgacctgcttgcggtgggg
gtgacccgctgttcgcgaacggtgatcctgacctcgacgggatccaccgaggacacccag
acgctcctgtcctgcttcacactcgacagcctcagcctgcagaccgaggccccaaccaca
ctcagcccctccagcaacacccagggactcgacccacaaaacacaaccggacactccgtc
cctctgctggcggaactgggtaacaccttgaacgtgaagcttatgaatgacacggacggt
ctggaggaggaagacagtttcccgctgacggaggacttctccgtaggcaaggtgttctct
gtggacgtgctggactcgctcatggccgccacatacttcaactccaacgttcccttgctg
gtgtcaacactggtgacgggcggggacacgcccctcctggaggcccagttcgtcagggac
aacaagctgaaaggaggggtcatgactccgcagctctgggccctgcgccggaggtccaaa
ctggcccagctggccctgcaggagcagcccctctgtcacctacagtgtgtgttgtacagg
gatctgtttgtccaggctctggactctctggagatcctgtgtttcggcctgtaccgtctc
gtagaccctcccaaccgcttcatgaagaggtttgtgatcaccaaccctcgaagtgacctc
cctctgctggcctcagaccaggtcttctgctccgtccccttccatcagtcccacctgctg
acccagtcaccccctctgaaccttcaccagaccccacacgactccagcatcctctga
DBGET
integrated database retrieval system
