Osmerus eperlanus (European smelt): 134028327
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Entry
134028327 CDS
T10927
Symbol
si:ch211-186j3.6
Name
(RefSeq) LOW QUALITY PROTEIN: neural-cadherin
KO
K27892
neural-cadherin
Organism
oep Osmerus eperlanus (European smelt)
Brite
Cell adhesion molecules [BR:
oep04515
]
Cadherins
Cadherin related
134028327 (si:ch211-186j3.6)
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GFIT
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NCBI-GeneID:
134028327
NCBI-ProteinID:
XP_062327793
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Position
10:12390083..12452642
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AA seq
2015 aa
AA seq
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MAASCYRTFVSEDAGPNTLVATVLAKDPDGDGITYKITAGNEEGNFVIDSHKGLIRLRSS
PTPRLQGVEYVLNVTATDDNASGGSQELSSTAQVIVGVDDVNNNKPVFEKCQQYRESTSV
LENQPAGTVVLQVQAVDADEGSNGRVTYGFMHKDSTVPAFTIHPETGVISSARKFDREHQ
REYAVTVTATDQAGDPLIGICQLNILILDQNDNNPKFENLRYEYFLREDTMIGTSFLRVA
AHDDDFGSNAAITYSMSQEEPEYLRVNPLTGWVYVNQPISQRTYISREIVATDGGNRSSS
VELAVTITNVKNQPPQWEKDSYDIVIPENTVRDTPIVTIKATSPLGDPRVTYNLEDGMVP
ETNMPVRFYLTPNRDDGSASILVAEPLDYETTRTFMLRVRAQNVAAVPLAAFTTVYINVT
DVNDNVPFFTSSIYEASVTEGAESGTFVLQVSANDLDLGLNGKISYSLLSDRSGDHKYFR
IDPDVGSIHTEAVFDRETKGSYLLEVQSVDGWESARPGKHGLPNSDTAYVRVFISDVNDN
KPRFAQTAYEVDVEEDADVGLAVLTVSANDEDEGANAKLRYQITSGNTGGVFDVEPEVGT
IFISQPLDYEVTKHYKLHLLASDGKWEDYAVVTVNVVNKNDEAPVFTVNEYYGSVTEELD
GSPVFVLQVTASDPDKDADQEALRYSLHGQGADSQFVIDEVTGKIYAQRTLDREERAVWR
FVVLATDEGGEGLTGFTDVIINVWDINDNPPIFTCAPDCHGDVPENSGPGTSVMEMTATD
LDDPAVGQNAVLSYRILGNAGADGVVRIGGVASDMFSVNPGTGTITVAMSGLDREQVESY
FLVVEAKDGGGMAGTATATVHVGDANDHAPRFTVPRPCLARVSESAEPNAVVLELTAEDG
DTGQNAQLTFSVVAGDPEQKFYLLSQRQEQRGSLRLKKRLDYERPSEKSFNLTLKVEDLD
FFSLLTCLVEVEDYNDHAPVFIPHFLQLMPLPEDVAVGTSVAQLAASDSDSGVNRDITYS
LSRDSDPQGLFAINQAGWITVAHPLDRESVAQHHLVVLATDRGRPPLTGSATVQLSLTDV
NDNGPEFEAAYSPVVWENVAGPQVVRLNHTSTLIRALDRDSEQNGAPFSFSLAPEYRHSG
DFYLQDNRNGTATVTALRAFDREKQKEFLLPVVMSDSGTPPRTVTNTLTVIIGDLNDHAH
QPGEKEIFINSHRGRMPTTVLGKVYAPDPDDWGNKTYAFEGHVPSYFILNKRTGFLIIKE
NAPPGSYEFQVRVSDGSWPDAISEVTVHVRELRDEAIYNSGSLRLADITAKEFVERRGGL
RSRYDLLVDFLSELVSVAVEDINVFSLMDVRERMLDVRFAVTGGAPYVRPEKLHGYLAAH
KQKLQSFLQVNVTQVHVDECSGTDCGASGGCSNVLSVRDTPTVVDSGTMSLVSVTVESSA
VCSCSGREHAHQPCTSYPRNPCFNGGVCVDTQSGYRCQCSAQYEGPECQQTKHSFHGNGY
AWFPPMRPCFESHVSLELITEAADGLLLYSGPLAPLQPWEHEDFMISQGLLVVFYNLGDG
DYNLTLPAYRLDNGXWHEVHLDRHDNELSLRLDGGGGRREVTGAXGRSREIVIDPLVVML
GNTFPSGFNRSFQGCMRDLRLSGRYVALDGQXLETGVSLVSSQGLSVGCTTDSCKKNPCS
PPLTCIDLWRVHECRCPAGHMIKVNGTKKSCVYTLCASRPCHRGTCVAQSPSKFTCHCPD
GYRGRHCETTLAIYRDDVGLSFSSLFAIVICFMALLVLLLGIFLYTRWRSYKGLKEGVYH
VSAHHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYSRSRALYHPH
PHNPHHPQLPPAQPQDGLNRAGSSGSAPPSSSTTTTTTSTASLRRDVPPARPPAQGQSRP
LQLANRSLSFSSQDLARYLCEIIRDADQHPETGPFDSLQVFSTEGGGSLAGSLSSFSSAG
LEEDRGGQGGDTLREWGPRFDKLCALYERAEASDL
NT seq
6048 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctcatgctaccggaccttcgtctccgaggatgcaggacccaacacattggtt
gccacggtgttggctaaggaccccgatggtgacggaataacgtataagatcacagcaggc
aatgaagagggaaactttgtcattgacagccataaagggctgatccgtctgcgctccagc
ccgactcctcgtctccagggggtggagtatgttctgaacgtcacggcaaccgatgacaac
gcctcaggcggatctcaagagctgtcgtcaacggcacaggtcatcgtcggggtggacgat
gtcaacaacaacaagcctgtttttgagaagtgccagcagtaccgagaaagtacctcggtt
ctggagaaccagccggcagggaccgtggtgctccaggtgcaggcggtggatgctgacgag
ggctccaacggcagagttacctacggcttcatgcacaaagacagcactgtgcctgccttc
accatccatcctgagacaggggtgatctcctcggccaggaaatttgaccgcgagcaccag
cgagagtacgctgtcacggtaacagcaacagaccaggcaggtgaccccctgatcgggatc
tgccagctgaacatcctcattctggaccagaacgacaacaacccaaagtttgagaacctc
cgctatgaatacttcctgcgtgaagacactatgataggaaccagcttcctgcgtgtggcg
gctcatgatgacgactttggctccaacgccgccatcacttactccatgtcccaggaagaa
cctgagtatctcagagtcaaccccctgacaggctgggtctacgtcaaccagcccatctca
cagaggacatacatttccagggagattgtggcgacagacggggggaacaggagcagctct
gtggagctggctgtcaccatcactaacgtgaagaaccagcctccacagtgggaaaaggac
agctacgacatagtcatccccgaaaacactgtcagagacacacctattgtgaccatcaag
gcgacgtccccgctgggcgaccccagagtgacctataacctggaggacggcatggtcccg
gagaccaacatgcccgtccgcttctacctgacccccaaccgtgatgacggctccgcctcc
atcctggtggcagagccgctggactacgagaccaccaggaccttcatgctgcgggtccga
gcccagaacgtagcggccgtcccactggctgccttcaccaccgtctacattaatgtcaca
gatgtaaacgacaatgttcctttcttcacctcttccatctatgaggcctctgtgactgaa
ggggcagagtccggaacctttgtcctccaggtgtcagccaatgatctagacctgggtttg
aatggcaagatctcctactccctgctgagtgacaggagtggggaccacaagtacttccgg
atcgacccggatgtgggctccatccatacagaggccgtgttcgaccgcgagaccaagggt
tcctacctgctggaggtccagtcagtggatggctgggagtcggccaggccggggaaacac
gggctgcctaactcagacacggcgtacgtgcgtgttttcatcagcgacgtgaacgataac
aagccgcgcttcgcccagacggcctatgaagtcgacgtggaggaggacgcagacgtgggt
ctcgccgtcctcactgtcagcgctaacgacgaagatgaaggggccaatgccaagctgcgc
taccagatcacgtcagggaacacgggcggggtgtttgatgtggagccggaggtgggcacc
atcttcatctcccagccgctggactacgaggtcaccaagcactacaagctgcacctgctg
gcctccgacggcaagtgggaggactacgccgtggtgacggtcaacgtggtcaacaagaac
gacgaggcgcccgtgttcaccgtcaacgagtactacggctccgtcaccgaggagctggac
ggctcgcccgtgtttgttctgcaggtcacagcctctgatcccgataaggatgcagaccag
gaggctctgcgttattctctccacggccagggcgctgacagccagtttgtcatagatgag
gtcacagggaagatctacgcccagagaaccctggaccgtgaagagcgtgccgtgtggcgc
ttcgtggtcctcgccacggacgagggaggggaggggctcacgggcttcactgacgtcatc
atcaacgtgtgggacatcaacgacaacccgcccattttcacgtgtgcgcccgactgccac
ggcgacgtgcccgagaactcaggcccggggacgtccgtgatggagatgaccgccaccgac
ctggatgacccggccgtcggccagaacgccgtgctctcctacaggattctgggtaacgcg
ggcgcggacggggtggtccggattgggggcgtggcctccgacatgttttccgtcaacccc
ggcacgggcacgatcaccgtggcgatgagcggactggaccgcgagcaagtggagtcctac
ttcctggtggtggaagcgaaggacggcggggggatggcgggcacggccacggccacggtg
cacgtgggcgacgcgaacgaccacgccccccgcttcacggtgccgcggccctgcctggcc
agggtgtcggagagcgccgagcccaacgccgtggtgctggagctgacggccgaggacggc
gacacgggccagaacgcccagctgaccttcagcgtggtcgcgggagaccccgaacagaag
ttctacctgctgagccagcggcaggagcagagaggctccctgaggctgaagaagcgtctg
gactacgagcgccccagcgagaaaagcttcaacctgactctgaaggtggaggacctggac
ttcttcagcttgctcacctgcctggtggaggtggaggactacaacgaccacgctcccgtc
ttcataccgcacttcctgcagctgatgcccctccccgaggacgtcgccgtgggaaccagc
gtggcgcagctggccgccagtgactccgactcgggcgtcaaccgtgacatcacctacagc
ctgtcacgtgactccgacccccagggtctgttcgccatcaaccaggcagggtggatcacc
gtggcacaccccttggaccgggagagcgtggcgcagcatcacctggtcgtcctggctacg
gaccgggggagacccccgttgacgggaagcgccacggtgcagctgtccctgacagacgtt
aacgacaacgggcctgagttcgaggcggcgtacagcccagtggtgtgggagaatgtggca
gggcctcaggtggtcaggctgaaccacacctccaccctgatccgggccctggaccgtgac
tcggagcagaacggagctcccttctcctttagcctggcgccagagtaccgccacagcggg
gacttctacctgcaggataacagaaacggaacggccaccgtcaccgccctgagggccttc
gaccgggagaagcagaaggagttcctcctgcccgtcgttatgagcgacagcggaacccca
ccacgcaccgtcaccaacacgctgaccgtaatcataggcgacctgaacgaccacgcccac
cagccaggagagaaagagatcttcatcaacagccacagagggaggatgccaactacagtc
ctggggaaggtctatgctcccgaccctgatgactggggtaacaagacatacgcctttgag
ggacatgtacccagttactttatcctcaacaagcggacaggcttcctcatcatcaaggag
aacgcccctccagggagttatgagttccaggtgcgtgtctctgacgggtcgtggccagac
gccatctccgaggtaacggtgcatgtgagggagctgcgtgacgaggccatctacaactca
ggatccctccgtctggcagacatcacagccaaggagtttgtggagcgccgcggtggcctg
agaagtcgctacgacctgctggtcgacttcctgtcagagctggtttccgtggcggtggag
gacataaacgtgttcagcctgatggacgtgagggagcggatgctggacgtccgcttcgcc
gtaactgggggcgccccctatgtccggccagagaaactgcacggttacctggcggctcac
aagcagaagctccagtccttcctccaggtcaacgtgacccaggtccacgtggacgagtgt
tccggtaccgactgcggagccagcggtggctgctccaacgttttaagtgtccgggacacg
cctaccgtggtggattctgggaccatgagtctggtgtcagtgacagtggagtcctcggcc
gtctgcagctgttctggacgcgaacacgcccaccagccctgtacttcgtatcccagaaac
ccttgcttcaacgggggagtgtgtgtggatacacagagtggttacagatgccagtgctcc
gcgcagtacgagggacctgaatgtcagcagaccaaacacagtttccacggcaacggctac
gcttggttccctcccatgaggccgtgctttgagagtcacgtctctctggagctgatcacg
gaggcagcagatgggctgctgctctacagcgggcccctggcccctctccagccctgggag
cacgaggacttcatgatctcccagggtctgctcgtcgtcttctataacctaggagacgga
gactacaacctgacgctgcctgcctatcgccttgacaacgggnagtggcacgaggtccac
ctggatcgccacgacaacgagctcagcctccggttggacggtggtggcgggaggcgggag
gtcacaggggcgnccggacggagtcgggagatcgtcatcgaccccttggtggtgatgctg
gggaacaccttcccctctggcttcaacaggagcttccagggctgcatgcgagacctgaga
ctgagtgggcgttacgtggcgttggacggccagnncctagagacgggggtctccctggtc
agctcccaggggctctctgtggggtgcaccacagactcctgtaagaagaacccctgcagc
cctcccctcacctgcatagacctctggagggtccatgagtgcaggtgtcccgcgggtcac
atgatcaaagtgaacgggaccaagaagtcgtgcgtgtacacgctgtgcgccagccggcca
tgccaccggggcacgtgcgtggcccagtcgccctccaagttcacgtgccactgtcccgat
ggctaccggggccgccactgcgagaccacgctggccatctacagggacgacgtgggcctc
agcttcagctcgctcttcgccatcgttatctgcttcatggcgctgctggtgctgctgctg
ggtatcttcctgtacacgcgctggcggagctacaaggggctgaaggaaggagtctaccat
gtgtccgctcaccacgacggctgggaagatatccgagaaaacgtcctcaactacgacgag
gaagggggaggggaggaagaccagaatgcttatgacatggcggagctgcagaagtccctc
cagcccagcccggcccagtctgtccagtacagccgctcccgagccctgtaccaccctcac
ccccacaacccccaccacccccagctccccccggcccagccccaggacggcctcaaccgg
gcggggagctccggctcggcgcccccctcttcctccaccaccaccaccaccacctccacg
gccagcctccgcagggatgtgcccccggcgaggccccccgcccagggccagagccgtccc
ctgcagctggccaacagaagcctgtccttctccagccaggacctggcccgctacctgtgc
gagatcatccgcgacgcagatcaacacccagagacggggccgtttgactccctgcaggtg
ttctctactgagggagggggctccctggcgggctccctcagctccttcagctcagctggg
ctggaggaagaccggggagggcaggggggggacaccctcagagagtgggggccccgcttc
gacaagctgtgtgccctctacgagagggctgaggccagcgacctctga
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