Osmerus eperlanus (European smelt): 134028344
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Entry
134028344 CDS
T10927
Name
(RefSeq) polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134028344
04091 Lectins [BR:
oep04091
]
134028344
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134028344
Lectins [BR:
oep04091
]
C-Type lectins
Others
134028344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Lectin_C
Ion_trans
GPS
REJ
PKD
Motif
Other DBs
NCBI-GeneID:
134028344
NCBI-ProteinID:
XP_062327812
LinkDB
All DBs
Position
10:15463020..15477297
Genome browser
AA seq
2178 aa
AA seq
DB search
MESMSFTQLLLSTLFLLCPSGAEEESEAFACPEHQQGFDSSCYEFGGLRRSFFSAQGWCE
RGGGHLAFIHNEETQQFLQKHLESETDWWLGLAPASTNLTLDSSAAEGPLSWLDGSDVSY
SNWVSSPAPGAGCAHILRNSGFQWEATANCSQEFTFVCEFESGRTIACAHHNATLQCGSG
QVIEVDDSFYGRKTAHYCRLSPNPSPTSTQEECSWMDVVDSVTGDCHGLQVCQATVDVTS
FGEPCPGLGSYLSVEYHCKEALRLSLRKKGVVHENITATVKWLLQPFQGDLTCTLRAGDG
HLFSPNTNDSVVHKYSHPGVYLVLVDCSTSEWHVTVQKTITIQEPVGEFGVIKCYSPNHS
TDGANCKGLYGSLLLIQVEVEAGTNVTYRIQSGDMLVSHSSVVRGIIPHNITVGPEVQEQ
LGSGCHQLSLKASNGVTTPGVSTELQVCLLEPVEGLQASLLLEEGQCPDSHLPISVSLEH
GAPAQLLFSVTGDNKTFSETRHMHNSSLQVYNITPTVQDMHLRCSDVSKVNSVYLPFGES
INNYKLSVVATVTDKITKTKKNTIITTEVRPADSSSTVQELQSAVVDSVAQLQQQGLLSG
ENLGQMFQSVSDMLNENNDDEQKEGREKLREQMLTIITEEEKVAPCRTPLSVQVTARAVS
GLTIQGSELTTKAQKQASSLVADLSSSLLAMNISQEDGGDVLNAAIAIVQVASNLLEFSS
NVSKQRTISDYIVSSLAYVQSVLLIGKKVNEGPTIIRTAKISVYVKRASPETLQMQSIIV
PKNTSSSFSLPPLPADVLPLEEPVDVRMLSLANNPFSWSQAGNISGVVGSMSISKENGSV
IPIENFAEEIEILLPRLDGEQVNSTILNLSNYSTLKINVTSPDVTLVLRMEPSEDLTFKL
FLSDKNYPTTADYVAKTQMPHQGSKREERYIWVLAPSDRGGHVGEHYLVVQPIVEAGVKS
VNASVSVTSIAAQCKYWNESQSAWSEAGCRVGPLTTPFVTQCLCNHLTFFGSSFFVMPNV
VDVSRTAELFSTFTENPVVVCFVGAVFVAYLLVVVWARRKDIKDTAKVKVTVLEDNDPLA
EYGYMLNISTGHRRGASSSAQVTVTLLGTEGESEPHHLTDPDKPVFERGAVDTFLLTTPF
SLGELQSIRVWHDNSGEHPSWYVNKVMVQDLQTGQKWHFLCNSWLAIDMGDCLLDRSFPV
ATEMDLKRFSNLFFMKTAKDFRDGHIWFSVISRPPNSTFTCVQRVSCCFSLLLCTMLTNI
MFYGIPTDPSEQTMDLGHIEFTWQQVMIGVQSSIIMFPINLLIVSIFRNTRPREKKPGQP
KTEASKQGKTGRVSPSQPPSPQMEHKDITPDTVIKDIKRIAQSLSKAMKSPMPRLELELG
SGRQADINTLLSLVEDIIRQQNRAGGEFYTDVCKREGSLLLSLGSVELQDSSLCGSPEKT
VDRSQKRSSNSQYLYRQLRHVEKELSLLGPSRFPNPHSYQRAVQQVQGMKGLLESQLSSS
SLGGDQPACSISPAESLDEDTSKRKCCSGGLPWWFVFVGWILVLATSGVSGFFTMIYGLH
YGKERSISWLISMVVSFFESLLITQPLKVLGFAVFFALVLKKVDQEEYGDPKVDGILKNP
DEAGAMRAARRDSTCSFYQPPPPSDIEKIRNNLMKEQKVFALIREILTYMGFMWMLLLVA
YGQRDPNAYFLTRHIQQSFTQGISDNMSPGDVFTWANTSLLNNLFGEYPGFITDGNSKLV
GNARLRQVRVQKNSCRVPRSMRQSVPDCHAPYSWEVEDMGSYGPGWNRSVGDNSSVSLRS
PWKYQSQARLRSYPVWGSLVLYRGGGFVEELGPDSYNASRTIQFLFDSTWIDMYTRAVFI
EFTVYNANVNLFCIATLMLETTAVGAFQFRSELQSVRLYQSTGGLHIFVMASEVVYFLFI
LYYMFVQGKLMKQHKWGYFRSKFNLVELAIIVLSWSALSVFIKRTLLGNRDMAYYHDHKD
QFASFHATATADAVLGYVIAFLVLLATVKLWHLMRLNSKLHMITATLQRAWTDISGFLVV
ITIMTLAYSIVFNLLCGWRLSSYKTLMEAAHNMVSLQLGIFNYDEVLDYNPVLGGFLIGS
CIVFMTFVVLNLFISVILVAFNEEQKHHKPSEEEEIVDLMLMKLCGLLGIRCKQGQKNLG
EKYTTAPAINKEPSTISL
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atggagagcatgtctttcacccagctgctactgagcactctcttccttctctgtccatcg
ggtgccgaggaggagagtgaggctttcgcctgcccagaacaccagcagggctttgatagc
tcctgttatgagtttgggggtctccggcgttctttcttcagtgctcagggttggtgcgag
cgaggtggaggacacttggcattcatccataatgaggaaacccagcagttccttcagaag
cacctggagtctgaaacggactggtggctggggctcgccccggcctccacaaacctcact
ctggattcttctgctgctgaagggcccctgtcgtggctggatggctcagatgtcagctac
tctaactgggtgagcagtccagctccaggggctggctgtgcccacatcctcagaaactca
ggcttccagtgggaggccacagccaactgcagccaggagttcacctttgtctgcgagttt
gagtccggtcgcactattgcatgtgcacaccacaacgccacactgcaatgcggttctggt
caagtgatagaggttgatgacagcttctatggtcgtaaaacagctcattactgccgtttg
agcccaaatccttcacccacatccacacaggaagagtgcagctggatggatgttgtagat
tcagtaacaggagattgtcatgggctgcaggtgtgccaggctactgtagatgtgacctct
tttggtgaaccctgtcctggacttggaagctacctgtctgtggagtaccactgcaaagag
gctctgcgtttgtcactgagaaagaagggggtggtccatgaaaacatcacggccacagtg
aaatggctcctccaaccattccagggcgacctcacctgcaccctgagggctggagatgga
caccttttcagtcccaacacaaatgacagtgtggttcataaatacagccatccaggagtc
tatttggttttggtggattgtagtaccagtgaatggcatgttacggttcagaaaaccatc
accattcaggagcctgtcggagagtttggtgtcatcaaatgctatagcccaaaccactca
acagatggcgccaactgcaaaggtctctatgggagcctattgttaatccaggtagaagtg
gaagctggtacaaatgtgacctatagaatccagagtggggacatgttggtgtctcactca
tctgtggtcagaggaatcattccccacaacattacagtgggtccagaggttcaggagcag
cttgggtctggctgccaccagctaagcctgaaggcgtctaacggggtcacgacccctgga
gtgtccacagagctgcaggtgtgcctgctggagccagtggaaggcttgcaggcctccttg
ctgctagaggagggccagtgtccagactcccacctccccatcagtgtctctctggagcat
ggagctccagcacagctcctgttctctgtgactggagacaacaagactttctctgagacc
agacacatgcacaacagcagtctgcaagtttacaacatcacaccaacagtacaagatatg
cacctccgctgtagtgatgtaagcaaagtgaactctgtctacctcccctttggcgaaagc
atcaacaactacaaactatcggtagttgctacagtcacagacaagatcacaaagaccaaa
aagaacactatcatcacaactgaggtgcgtccggccgactccagctctacagtgcaggag
ctccagtctgcggtggtggactctgtcgcccagctgcagcagcaggggctgctctctgga
gagaacctgggacagatgttccagtctgtgtctgacatgctgaacgagaacaacgacgac
gagcagaaggaaggcagggaaaagctaagagagcagatgctgaccataattactgaagag
gagaaggtcgccccctgcaggaccccgctgagtgtgcaggtgacagccagagcagtctca
ggactcaccatacagggcagtgagctcactaccaaagcccagaaacaggcaagttctcta
gtggcagacctcagctcctcccttctcgccatgaacatcagtcaggaagatggaggggat
gtgttgaatgccgcaattgcaatagtacaggtggccagcaaccttttagagttctcttca
aatgtaagcaaacagagaaccatctcggactatattgtcagtagcttggcgtatgtacag
agcgtattgttgattggaaaaaaggtcaacgaggggccgaccattatacgcactgctaag
atcagtgtgtatgttaaaagagcatctccagaaacccttcaaatgcagtcgatcatcgtt
ccgaagaacacctcctccagcttctccctccctcccctccctgctgacgtccttcctctg
gaggaaccggtggatgtgcggatgctgagtttggcaaataatccattctcttggagtcaa
gcaggaaacatcagcggtgttgtcggctcaatgtctatcagcaaagaaaatggctcagtc
attcccatagagaactttgctgaggagatagagatattattgcccaggctggatggagaa
caggtgaacagtacaatcttgaacctgagtaactacagcactctgaagatcaacgttact
tcacctgatgtgacgctggtgctgaggatggagccatcagaggacttgacctttaaactg
ttcctgagtgataagaactaccccaccacagcggattatgtagctaagactcagatgcca
catcagggtagcaaacgagaggagaggtacatatgggtgctggctcccagtgatagagga
ggacatgttggggagcactaccttgtggtgcaacccattgtggaggcaggggttaaatca
gtaaatgccagcgtgtctgtcacctccattgctgcccagtgcaagtattggaatgagtct
caatcagcttggagtgaggccggctgcagggttggccctctcaccaccccgtttgtcact
cagtgcctatgtaaccacctgaccttctttggaagctctttcttcgtcatgcccaacgtt
gtggatgtgtctcgcaccgcagagctcttctctaccttcactgaaaacccagtggttgtt
tgctttgtgggcgccgtctttgtagcttatctcctggtggtcgtgtgggcacgcaggaaa
gacatcaaggatactgccaaggtaaaggtaacagtactggaggacaacgaccctttggct
gagtatggctacatgctgaacatcagcacaggacatcgacgtggtgcctccagctcagct
caggtaaccgtgactctgctgggcacagagggggagagtgagccccaccacctcactgac
cctgacaaacctgtgtttgagaggggtgcagtagacaccttcctgctgaccacccccttc
tccctgggggagctgcagagcatcagggtgtggcacgacaactctggagaacacccgagc
tggtacgtaaacaaagtaatggtgcaagatttacaaactgggcagaagtggcacttcctc
tgtaactcctggcttgccatcgatatgggagactgccttctagatagatccttccctgtt
gccactgaaatggatctaaagagatttagtaacctgttcttcatgaagacagccaaagac
ttccgtgatggtcacatctggttctctgtgatcagccgtcctccaaacagcacctttaca
tgtgtgcagcgagtatcatgctgtttttctctgctgctctgcaccatgttgaccaatatc
atgttctatggcatcccgactgacccctctgaacaaacaatggacctgggtcacattgag
ttcacctggcaacaagtgatgattggagttcaaagttctatcatcatgttccccatcaat
ctgctgattgtgagtatcttcagaaacacccgcccccgagagaagaagcctggtcaaccc
aagacagaggcctccaagcaggggaaaactggccgtgtgtctccatcacagcctccttct
ccacagatggaacacaaggacatcacaccagacactgtcatcaaggacatcaagaggata
gcccagtctctctccaaggccatgaagagccccatgcctcgtctggagttggagctgggg
tctggacgacaggctgacatcaacactctgctctctctggtggaggacattatcagacag
cagaaccgtgcaggtggagagttttacactgatgtctgcaagagagaaggatctctcctt
ctgtctttaggttcagttgaactacaagacagcagcttgtgtgggagccctgagaaaact
gtagacaggagccaaaaacggagcagcaacagtcagtatttgtacaggcagctccgccat
gttgagaaggagttgagtctactgggaccttctcgcttccctaacccacacagctatcag
cgggctgtgcagcaggtccagggcatgaagggattactggagtcccagctctcttcctcc
agccttggaggggaccaaccggcatgcagcatcagcccagcagagagcctcgacgaggac
accagcaagaggaagtgctgttcaggagggctgccgtggtggtttgtgtttgtgggctgg
atattggtgctcgccactagcggtgtgtccggattcttcactatgatatatgggctgcat
tatgggaaggagcgctccatcagctggctcatctctatggttgtgtccttctttgagagc
ctcttgatcacacaaccacttaaggtgctgggatttgctgtcttctttgctcttgtgctt
aagaaagttgatcaggaagaatatggtgatcctaaggtcgatggaattctcaaaaaccca
gatgaagctggtgcgatgcgggcagccaggagggacagcacatgcagcttctaccaaccc
cctcctccaagtgacattgagaaaataaggaacaacttgatgaaagaacagaaggtcttt
gctctcatcagggagattctaacctacatggggtttatgtggatgttactcctggtggct
tatggccagagggatcccaatgcttacttcttgactcgacacatccagcagagcttcacc
caaggaatttctgacaacatgagtcctggtgatgtgttcacctgggcaaacacctctcta
ctaaacaacctgtttggagaatatccaggtttcatcacagatgggaactccaagctggtg
ggtaatgctcgccttcgccaggtgagggtacagaagaactcgtgccgcgttccccgctcc
atgcgccagtctgtgcctgactgtcatgctccctactcatgggaggtggaggacatgggc
tcatatgggcccggctggaaccgctctgtgggggacaactcctcagtgagccttcgcagc
ccatggaagtaccagagccaggcccgactgaggtcatatcctgtctggggtagtttggtt
ctgtacagaggaggtggctttgtggaggaactgggcccagactcatacaatgccagcaga
accattcagttcctgtttgacagcacctggattgacatgtacacccgggcagtcttcata
gaattcactgtgtataatgccaatgtcaacctcttctgcattgccactctcatgctggag
accactgccgtaggggcgttccagttccgcagtgagctgcagagtgttcgtctttaccaa
tcgactggtggtcttcacatctttgttatggcctctgaggtcgtctactttctcttcatc
ctgtattatatgtttgttcagggcaagctgatgaagcagcacaagtggggttacttcagg
agcaagtttaacctggtggagttggctatcatcgtcctgagctggagcgctctgtctgtc
tttatcaagaggactcttctgggaaacagggacatggcctactaccacgaccacaaagac
cagtttgctagtttccatgccacagcgactgctgatgctgtgctgggctatgtgatagcc
ttcctggtgctgctggcgacagtcaagctctggcatctgatgagactcaactccaagctg
cacatgatcacagccacactgcagagggcctggactgacatctcaggcttcctggtggtc
atcaccatcatgactcttgcctactctatcgtttttaatttgctgtgtggctggaggctg
tcatcatataagaccctcatggaagctgctcataacatggtcagcttgcagctgggcatc
ttcaactatgatgaggttctggattataatccagtcttgggtgggttcctcattggctcc
tgcatcgtgttcatgacctttgtggtgctgaaccttttcatctcagtcatcctggtggct
ttcaatgaagagcagaaacatcacaagccctctgaagaggaggagatcgtggacctgatg
ctgatgaagctctgtggtttgttagggatcaggtgcaagcagggccagaaaaaccttgga
gagaagtataccactgcccctgccatcaacaaagaaccctccactatctctttatag
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