Osmerus eperlanus (European smelt): 134028396
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Entry
134028396 CDS
T10927
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03015
mRNA surveillance pathway
oep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134028396
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134028396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134028396
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
134028396
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Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
134028396
NCBI-ProteinID:
XP_062327901
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Position
10:complement(17643273..17647986)
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AA seq
447 aa
AA seq
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MAGTGTSADGNTQDLDIYDDNFNHNGEDEMNDLYDDVLTGSVSRERLPNETVPSKKDDRP
TKEEVSATSILNTRSAAPTKRLAVYVGNFSWWTSDTDLTTMAQTLGVKDIVEIKFAENRA
NGQSRGYAEVVVATEESLQKLLEALPYCQMNGEKVDCRFATRQNLAVFEAMANKRVPQRA
NSKESTDSTDKHPSAPSLEPNSIPHIPPPPHHLPNRPPPLSVPFFSRPPPLFPLLPPHIP
PPSMPHLFPPPPLHLHSQPPPSSLHLNPAFFPPAHDSYSTTSAYSRLNRDSDAPTPLVPD
GEFEELMNRNRAIASSAITKAVSGATAGDLRVAMETLLTAIAVIKQSRVFGDERCQTLVT
SLKDCLVSIQANFGTRKRHRSRERERDRDRERDRERERDRDREDFYSQGWESAGMSRRHR
ERSSSGERDRERLRERDRHRDHRERHR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtacaggtacctcagccgatgggaacacccaagacctagatatctacgatgac
aatttcaaccacaacggagaggatgagatgaatgatctttatgacgacgtcctcacgggt
tctgtgagtcgggagagacttcctaatgagaccgtcccttccaagaaagacgacaggcca
acgaaggaggaagttagcgcaacatcaatactgaacactcgcagtgctgcaccaaccaaa
agactggcagtctatgtaggcaacttctcctggtggacctcagatacagatttgactacc
atggcccagactctgggggtcaaggacattgtcgagatcaaatttgcagagaacagagcc
aatggccagtctagaggatatgctgaggttgtggtggccacagaagagtcattgcagaaa
ttgctggaggcgctaccctactgtcaaatgaatggggagaaggtggactgtcgctttgcc
actcgacagaatcttgctgtgttcgaggccatggccaacaaacgtgtcccccagcgggct
aactcgaaggagtccacagactcgacagataaacatccttccgcgccgtctctggagccc
aactccatccctcacatacctcctcccccacaccacctccccaacaggccccctccgctg
tccgttcccttcttcagccggcctcctccactctttcccctcctcccaccacacatccca
cctcccagcatgccccacttgttccccccaccacccctccacctgcacagccagccgccc
ccctccagcctccatctgaacccagccttctttcctccagcacacgacagctacagcaca
acctcagcctacagccgactcaaccgggacagcgacgcccctacacccctggttccagat
ggggagtttgaggagctgatgaacaggaatagagccatagccagcagtgccatcaccaag
gctgtgtctggggcaacggcaggagacctgcgtgtggccatggaaacacttctaacggcc
atcgctgtcattaaacagtccagagtgttcggagatgagcgatgtcaaaccctggtcacc
tcacttaaagactgccttgtctccattcaagcaaactttggcaccaggaaaagacatcgt
tccagagagagggagagagaccgtgacagggagcgagatcgtgagcgggaaagggacagg
gaccgagaggacttctacagccagggttgggagtctgctgggatgtcacgacgacacaga
gagcgttcctcaagtggggagcgagacagagagaggctgcgagaacgagacaggcaccgg
gaccatcgagagagacaccgctaa
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