Osmerus eperlanus (European smelt): 134028443
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Entry
134028443 CDS
T10927
Symbol
cdh16
Name
(RefSeq) cadherin-16 isoform X1
KO
K06810
cadherin 16, KSP-cadherin
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134028443 (cdh16)
Cell adhesion molecules [BR:
oep04515
]
Cadherins
Major cadherins
134028443 (cdh16)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
REC-like_halo
Motif
Other DBs
NCBI-GeneID:
134028443
NCBI-ProteinID:
XP_062327988
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Position
10:complement(7718302..7735239)
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AA seq
819 aa
AA seq
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MEERGVITALTLAFLQVLAPSSAANVKIGVPENYDGIFPWYLAKLPNLPAVYSDLQVSGD
DESIFGVEAGFLYALKPLDREKQPSYSLQVSFTSSVHPESFNVEVCVIDKNDNVPSFIEG
SMRGSVQLGLLKGIPFMQVGASDRDDRNTAHAELRFSLMDQTPRIPSPHMFFIDSVSGEV
SLTEDGASTLDPEMCGRYKLSVIVKDMAGRAKAFSSSGLVTVEVTGNSWASPDPVRLQEN
LPGPYPIPISKVKWSGSLVEYSLEGEFPEMLFTISREGVIFLNAPLDRETQDQFQISIVV
ERPDGREIAKPVELRVMVGDANDNRPTFPQTQYHTVVKELAPRGTEILTVQAADNDDPKT
DNVRIFYRLVGQVPESPRALFRVDRDSGVISVQADSMEGTAPQYTLTITAEDAKGLNSSC
TVVVMVQDENNNPPVFSQHEYGPFHMSEDAPVGATVTAVSAWDADERGGDSWQVDYRLES
GNEEDAFSLLTDTQTNEVSLILSKVLDFERESEYILVISAQNPVALVRGRYGPASTATVS
IYVDDVNEGPILSQSHYEVNVREGEEPGRVIATIRGYDPDSHPIRYSLRGDTKRYFSIGK
YSGELKTVQALDREENSTYTMEIIAEDGRNSSLSASTLVTVQILDVNDNSPVLVGDYSWK
YLCTPRWEEQALVLASRDSDTPQHGGRLNFSLRSDATVRRNWKLTPINDTHTNLSLNTPY
LSPEIYTVPFTISDSSSPPRSTFINLPVTVCPCNVRGNCKMATKQLQGMPTIQSTVGILL
GTLGVIGTILTVVFVRLSYQNPKPPSTTNQERVPLRISL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagaggagttatcacagcactcactttggcattcctccaagtgcttgcacca
agttcagctgccaacgtcaagataggagtccctgagaactacgacggaatcttcccttgg
tacctggccaagctgcccaacctgccagcggtctacagcgatctgcaggtgtcgggggat
gacgagagcatctttggtgtggaggctggtttcctgtatgctctcaaacccctggacaga
gaaaagcagccatcctactctctacaggtgtctttcacatcatcggtgcaccctgagagc
tttaacgtggaggtgtgtgtgatcgataagaacgacaacgtcccctcattcatagagggg
agcatgagaggcagcgtgcagctcggccttctgaaagggatccccttcatgcaggttggg
gcgtcagaccgtgacgacaggaacacggcccacgcagagctcaggttcagcctgatggac
cagacccccaggatcccctcccctcacatgttcttcattgactctgtctctggagaggtc
tccctcaccgaggacggagcatctacgctggacccagagatgtgtggccgctacaagctg
tccgtcatagtgaaggacatggcgggccgggccaaggccttctcttcctctggcctggtc
actgtcgaggtgacaggaaacagctgggcatcgcccgaccccgtacgtctgcaggagaac
ctccccggaccctaccccatccccatctccaaggtgaagtggagtggcagtcttgtagag
tacagcctggagggcgagtttccagagatgctgttcaccatcagcagagagggggtgatc
ttcctcaacgctcctctggatagagagacccaggaccagttccagatcagtattgtggtg
gaacgaccagacggccgggagatagccaaaccagtggagctgcgggtcatggtgggggat
gccaacgacaacagacccacctttccccagacccagtaccacaccgtggtcaaggagctg
gccccgcgtgggacggagatcctgacggttcaggcggctgataacgacgacccaaagacg
gacaatgtcaggatcttctaccgcctggtgggccaggtccctgagagcccgcgcgctctc
ttcagggtggaccgggactccggggtcatctctgtccaggctgacagcatggagggcacc
gctccccagtacacactcaccatcactgctgaggatgccaagggtctgaacagttcctgt
acggttgtcgtgatggtgcaggatgagaacaacaacccgcctgtcttctctcagcatgag
tacggccccttccacatgtcggaggatgctcctgtgggtgccacggtaacagcggtgtcg
gcgtgggatgcagacgaacgtggtggggacagctggcaggtggactaccgactggagtct
ggtaacgaggaggacgccttctctctcctcacagacacacagaccaacgaggtctctctc
atcctctccaaggtgctggactttgagcgggaaagtgagtatattctggtcatcagtgct
cagaaccctgttgctctggttcgcggtcgctatgggcccgcctccacggcaacagtctcc
atttatgtggatgacgtgaatgagggaccaatcctgtcgcagagccactatgaggtcaat
gtccgggagggggaagagccaggacgggttatcgccaccatcagagggtatgaccctgac
tctcatccaatcaggtactccttgagaggggatactaagcgttatttctccattggaaag
tactctggggagctgaagaccgtccaggctctggaccgtgaggagaacagcacctacacc
atggagatcattgctgaggatggacgtaactcatccctctctgcctccaccttggtcacg
gtccagatcctggatgtaaatgacaacagcccggtcctggtgggcgattactcatggaag
tacctgtgcacgccacgctgggaagagcaggccctggttctggcatcaagggacagtgac
acgccacagcacggaggccgactcaacttctcactccgaagcgatgccaccgtcaggcgc
aactggaagctcacgcccatcaacgacacacacaccaacctttccttaaacactccatac
ttgtctccggagatctacactgtccccttcaccatctcagacagtagctccccccccagg
agcacctttatcaacctgccagtgacagtgtgtccttgcaatgtcagagggaactgcaag
atggccaccaagcagctgcagggtatgcccactatccagtccactgtgggcatcctgctg
ggcaccctgggggtcataggaactatcttgactgtcgtttttgtgaggctgtcataccag
aaccccaaacctcccagcacgactaatcaggaaagggttcccctcaggatctccctgtag
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