Osmerus eperlanus (European smelt): 134028535
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Entry
134028535 CDS
T10927
Symbol
copb1
Name
(RefSeq) coatomer subunit beta isoform X1
KO
K17301
coatomer subunit beta
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134028535 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oep04147
]
134028535 (copb1)
Membrane trafficking [BR:
oep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
134028535 (copb1)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
134028535 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
Cnd1
HEAT
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
134028535
NCBI-ProteinID:
XP_062328137
LinkDB
All DBs
Position
10:14559139..14566833
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPNDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAVKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFESLRPLIIEKMLEVFHAIRTVKIYRGALWILGEYCSTKDDIQNVMTEVR
RSLGEIPIVENEIKKESGDSKPEEEQSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMEGDFYVAASLATTLTKLALRYVGIVPDKKRQNSFVAEAMLIMATVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLAVRMEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNETTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNDYLHHILGSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKSAV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgctgagaacgtttgttataccttgatcaatgttccaaatgactctgaacct
ccctcagaagtcagtttgaaagcagatctagaaaagggtgagatcaaggcgaagacagag
gccctgaagaaggtgatcataatgatcctgaatggagagaaactgcccggcctgttgatg
accatcatccgcttcgtacttccacttcaagaccacaccatcaagaagctgcttctggtc
ttctgggagatcgtccccaagacgactccagatggcaagctgctgcaggagatgatcctg
gtctgtgatgcctacaggaaggacctccaacaccccaacgagttcatccgtgggtccacc
ctgcgcttcctgtgcaagctgaaggagtctgagttgctggagcccctcatgcctgccatc
cgggcctgcctggagcatcgccatagctacgtccgccgcaacgctgtcctggccatctac
accatctacaggaactttgagaatctcatcccggatgcccccgagttgatccacgatttc
ctagtcaacgagaaggacgctagctgcaagagaaacgctttcatgatgctcattcacgca
gaccaggaccgcgctctggactacctcagcacctgcatcgatcaagtacatacgtttgga
gacattctccagttggtcattgtggagctgatctacaaggtgtgccatgccaacccctcc
gagcgtgctcgcttcatccgctgcatctacaacctgctgcagtcctccagcccagccgtc
aagtacgaagccgcaggcaccctcgtcacgctctccagcgcccctacggccgtcaaggct
gctgcccagtgctacatcgacctgatcatcaaggagagtgacaacaacgtcaagctgatc
gtcctggaccgcctgattgagctgaaggagcaccccacccacgagcgcgtgctccaggac
ctggtgatggacatcctgcgtgtcctgagcaccccagacctggaggtcaggaagaagacc
ctgcagctggccctggacctggtctcatcccgcaacgtcgaggagctggtcatcgtgctg
aagaaggaggtgatcaagaccaacaacgtgacggagcacgaggacacggataagtaccgt
cagctcctggtgcgcaccctgcactcctgcagcgtgcgcttccccgacatggccgccaac
gtcatccccgtgctgatggagttcctgagtgacacgaacgaggcggctgcggccgacgtg
ctggagtttgtgcgcgaggccatccagaggttcgagagcctcaggcctctgatcatagag
aagatgctggaagtcttccacgccatccgcaccgtcaagatctacagaggagcgctgtgg
attctgggagagtactgcagcaccaaggacgacatacagaacgtgatgacggaagtgcgc
cggtcgttgggggagatccccatcgtggagaacgagatcaagaaggagtcgggcgattcg
aagccggaggaggagcagagcgcggcgccggcccagaagctggtgacggagatggggacg
tacgtgacccagagcgccctcagctcgtccagaccgtccaagaaggaggaggacagacct
cctctcaggggcttcctgatggaaggggacttctacgtggcagcctccctggccaccacc
ctcaccaagctggctctgcgctacgtgggcatcgtcccagacaagaagagacagaactcg
tttgtggccgaggccatgctcatcatggccacggtgctccacctgggcaagtcgtctctg
cccaagaagcccatcacggacgacgacgtggaccgcatctcgctgtgcctcaaggtgctg
tccgagtgctcgcccctcatgaacgacatcttcaacaaggagtgccgcaagtcgctgtcc
cacatgctggccgtccggatggaggaggagaagctgtcccagaagaaagagtctgagaag
aggaatgtgacggtgcaggcggacgaccccatttctttcatgcagctgacggccaagaac
gagaccacctccaaggaggaccagttccagctcagcctgctggctgccatgggcaacacc
cagaggaaagaggcagccgaccccctggcctccaaactcaacaaggtgactcagctgaca
ggattctcagacccagtgtatgcagaggcctacgttcacgtcaaccagtacgacatcgtg
ctggacgtcttagtggtcaaccagaccagcgacaccctccagaactgtaccctggagctg
gccacactgggcgacctgaagctggtggagaagccgtcccctctcaccctggcgcctcac
gactttgccaacatcaaagccaacgtgaaagtggcgtccacggagaacgggatcatattt
ggcaacatcgtgtatgacgtttcgggggcagcgagcgacaggaactgcgtggtcctcagc
gacatccacattgacatcatggactacatccagcctgcctcttgcacagacgcagagttt
cgacagatgtgggccgagtttgagtgggagaacaaggtgacggtgaacaccaacatcacc
gatctgaacgattatctccaccacatcctcggctccaccaacatgaagtgcctgactcct
gagaaggcactctccggcttctgcggcttcatggcggccaacctgtacgcccgctccatc
ttcggggaggacgccctggccaacgtgagcatagagaagcccatccacctgggccccgac
gcgccggtcaacggccacatccgcatccgggccaagagccagggcatggctttgagtctg
ggtgacaaaatcaacctttcccagaagaagtctgcagtgtaa
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integrated database retrieval system
