Osmerus eperlanus (European smelt): 134028554
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Entry
134028554 CDS
T10927
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134028554 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134028554 (chrna5)
Ion channels [BR:
oep04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
134028554 (chrna5)
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Stealth_CR3
Motif
Other DBs
NCBI-GeneID:
134028554
NCBI-ProteinID:
XP_062328173
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All DBs
Position
10:4317836..4324336
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AA seq
473 aa
AA seq
DB search
MQRAGEAATTLTLLLCCSHLCHTLGIPKLSSYAKTEDKLFKHLFRNYQKWVRPVEYLNGT
VRVKFGLAISQLVDVDEKNQLMTTNVWMKQEWVDMKLRWKPEDYMGITSIRVPSNSIWIP
DIVLYDNADGRFEGTVTKAVVRYDGTIVWTPPANYKSACTIDVTFFPFDLQNCSMKFGSW
TYDGSQVDILLEDFHVDKRDYFDNGEWEIVKATGSRSFRTDDSCSYPFITYSFIIRRMPL
FYTLFLIIPCIGLSFLTILVFYLPSNGGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP
LIGEYLVFTMIFVTLSIVITVFAINIHHRSPSTHHGMAPWVRRIFLHRLPKLLCMRSHVD
RYACPGAARGGLIGGRVVGVGVMDTNLDNNHPLTSRNNLQAALDSIRYITMHVVKENQVR
EVVQDWKFVAQVLDRVFLWTFLLVSVLGSALLFIPVIYKWASIIVPDHTGGNS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcagagggcaggggaggctgccaccacgctcactctcttgctgtgctgttcccacctc
tgccacacactgggaatcccaaagttgtcttcttatgccaagactgaagacaagttgttc
aagcacctcttcagaaactatcagaaatgggtgagaccagtggaatacctcaatggaacg
gtgcgggtcaaatttggactagcaatctcccagctagtagatgtggatgaaaagaaccag
ctgatgacaaccaatgtgtggatgaaacaggagtgggtggacatgaagctacgctggaag
cctgaagactacatgggcatcacaagcatccgagttccctccaactctatctggatccct
gacattgtactctatgacaatgcagatggtcgttttgaaggcactgttaccaaggctgtg
gtcagatatgatggaaccattgtatggacaccaccggccaattacaagtcagcctgtacc
atagacgtcacctttttcccctttgacctccagaactgctccatgaagtttggctcttgg
acctacgatggctctcaggtggacatcctcctggaggacttccatgtggacaagcgggac
tactttgacaatggcgaatgggagattgtgaaagccaccggcagtcgtagttttaggaca
gacgacagctgctcctaccctttcatcacgtactccttcatcatccgcagaatgccactc
ttctacaccctcttcctcattatcccctgcattggcctgtccttcctcaccatcctggtc
ttctacctaccctccaacggcggggagaagatctccctctgcacctctgtgctggtctcc
ctcactgttttcctgctggtcatcgaagagatcatcccctcctcctcgaaggtgattccc
ctcatcggagagtacctggtcttcaccatgatcttcgtcaccctctccattgtcatcacc
gtcttcgccatcaacatccaccaccgctccccctccacccaccacggcatggcgccctgg
gtgcgtcgcatttttctgcatcggctgcccaagctgctatgcatgcgtagccacgtggac
cgctatgcctgccctggggctgctagagggggactgataggaggaagagtggtaggggtc
ggggtgatggacaccaacctagacaacaaccatccactgacctcgaggaataacctgcag
gcagcgctggactctattcgttatatcaccatgcatgtggtcaaggagaaccaggtcaga
gaggtggtacaggactggaagtttgtggcacaagttctcgacagggtgttcctgtggacc
tttctgctggtgtcagtccttggctcggctctgcttttcatcccggtcatctacaagtgg
gccagtatcattgtccccgaccacactggaggaaatagctaa
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