Osmerus eperlanus (European smelt): 134028599
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Entry
134028599 CDS
T10927
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain isoform X1
KO
K07375
tubulin beta
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04145
Phagosome
oep04540
Gap junction
oep04814
Motor proteins
oep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134028599 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
134028599 (tubb1)
09142 Cell motility
04814 Motor proteins
134028599 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134028599 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134028599 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134028599 (tubb1)
04147 Exosome [BR:
oep04147
]
134028599 (tubb1)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
134028599 (tubb1)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
134028599 (tubb1)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134028599 (tubb1)
Exosomal proteins of colorectal cancer cells
134028599 (tubb1)
Exosomal proteins of bladder cancer cells
134028599 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
DUF7169
Motif
Other DBs
NCBI-GeneID:
134028599
NCBI-ProteinID:
XP_062328208
LinkDB
All DBs
Position
1:24589422..24593615
Genome browser
AA seq
487 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGINATGNYEGDNVLQLERLNVYFNEAQGGKYV
PRSLLIDLEPGTMDSVRGSRIGKLFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVMDRV
RSESEGCDCLQGFQFVHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLIESTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYHALSVPELTQQMFDPRNMM
TACDPRRGRYLTVAGMFRGAMSTKEVDEQMLAVQQKNSRYFVDWIPHNVKVAVCDIPPRG
LKMAATFIGNNTAIQEIFRRIGEQFTLMFRRKAFLHWYTGEGMDEMEFTEAENNLNDLVA
EYQQYQDATADLEQEEEEQEEEEEEEEEERPSSSIVTDQTRMETKTEMVTETSTETVTET
SAETVTE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatcgtacatctgcagatcggacagtgtgggaatcaaatcggctccaagttt
tgggaggtgatcagtgaggaacatgggatcaacgccacaggaaactacgagggcgacaac
gtcctccagctggagcgcctcaacgtttacttcaacgaggcacaggggggtaagtatgtc
cccagatctctgctcattgatctggagcctggcacgatggacagtgtgaggggcagcagg
atcggaaagctcttcaggcccgacaacttcatccacggaaactctggggcaggaaacaac
tgggctaagggtcactacacggagggtgcagagctggtggagcaggtgatggaccgtgtc
cgtagcgagagcgagggctgcgactgtctgcaggggttccagttcgtccactccctgggc
ggtggcaccggctcaggcatgggcaccctcctcatcaacaagatcagagaggagtaccct
gaccgcatcatgaacacattcagtgtcatgccctcccccaaggtgtcagacacggtggtg
gagccctacaacgccaccctctccgtgcaccagctcattgagagcacggacgaaaccttc
tgcatcgacaacgaggcgctctacgacatctgcttccgcacgctcaagctgaccacgccc
acctacggcgacctcaaccacctggtgtccctgaccatgagtggggtcactacctccctc
cgcttccccggccagctcaacgccgacctccgcaagctggccgtcaacatggtgcccttc
ccccgcctgcacttcttcatgccgggcttcgcgccgctcaccgccagggggagccagcag
taccacgccctcagcgtgcccgagctcacccagcagatgttcgacccccgcaacatgatg
acggcctgcgaccccaggagggggcgctacctcaccgtggcggggatgttccgcggcgcc
atgtccaccaaagaggtagacgagcagatgctggccgtgcagcagaagaacagcaggtac
ttcgtggactggatcccacacaacgtcaaggtggccgtgtgcgacatccctccccggggc
ctcaagatggccgccaccttcatcggcaacaacacggccattcaggagattttccgccgc
atcggggagcagttcaccctcatgttccgccgcaaggccttcctccactggtacacgggc
gagggcatggacgagatggagttcacggaggctgagaataacctcaacgaccttgtggcg
gaataccagcagtaccaggacgcaacagccgacttggagcaggaggaggaggagcaggag
gaggaggaggaggaggaggaggaggagagaccgtcatctagtattgtgacagatcaaaca
agaatggaaactaagactgagatggtgacagagacgagcactgagactgtgacggagacc
agtgctgagactgtgacggagtga
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integrated database retrieval system
