KEGG   Osmerus eperlanus (European smelt): 134028749
Entry
134028749         CDS       T10927                                 
Name
(RefSeq) coatomer subunit beta'-like
  KO
K17302  coatomer subunit beta'
Organism
oep  Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:oep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oep04131]
    134028749
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oep04147]
    134028749
Membrane trafficking [BR:oep04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    134028749
Exosome [BR:oep04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   134028749
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_LRRK2 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 134028749
NCBI-ProteinID: XP_062328509
LinkDB
Position
11:4744876..4755493
AA seq 1363 aa
MPLRLDIKRKLTSRSDRVKSVDLHPTEPWMVASLYNGSVCVWNHETQTLVKTFEVCDLPV
RVAKFVARKHWVIAGADDMQIRVFNYNTLERSHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDRKWVCGQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSNTPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIILTGSEDGTVRVWHSSTYRLENTLNYGMERVWCVCGQRGSNSVALGYDEGSILIKLG
REEPAMSMDASGKIMWARHSEVQQANLKALGEAEIRDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAVALRNKSFGSAQEFVWAHDSSEYAIRESNSMIKIFKNFKE
KKGFKPDFGAEGIHGGFLLGVRSTSGLAFYDWENAELVRRIEIQPKHIFWSDSGELVCIA
TEESFFVLRYLSEKVAVAQETKEGVTEDGIEDAFEVLGEIQEVVKTGIWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTTYLLGYIPKDDRLYLGDKELNIVSFSLLVSVLEYQTAVMR
RDFSMADRVLPTIPKEQRTRVAHFLEKQGFRQQALGVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELATTKCQFGLAQECLHHAQDYGGLLLLATASGNASMVGKLAEGAE
RDGKTNVAFLTYFLQGKLEKCLDILIKTNRLPEAAFLARTHLPSHVSRVVKLWKDSLSKV
NQKAADALADPTEYGNLFPGLQQALLAETYLRETHVCLRPAAEYPRITPSEDRSVLEESS
GYVPTGGPSAEKVPEFMEEPPVVAEVVAAAAPEAPVLEEAITMEEEEPVVAAVDKSVAME
DVKSITAAVEESIAMSAEETPVTEVEQPIMAEEEAPISVEVVASEPEVTADVEDTIAKQE
EVPVTAEGDLLGDIITDTPPTIPDMVQSLEQDVMVTEEAAEDGASTAEVIATDPAPVADA
FSATEEDHDKETVTPVYEATLQVMATEEAPVTDSVIPEAIATEKAPEAVVIETVVATEAN
PVAELLSESIATEEVSVTEEVITEAIATEATPVTEVAPEPLANEPTPEMVTIDTMAVSEK
VVTQVLPEPIVPAYPVEDLITVEEPMSVPAPLLDPFPSMAPVLEPFSSLAPAPNPATAPA
LDLFSDLAPAPNPATAPALDLFSDLAPAPNPATAPALDLFSDLAPAPNPATAPALDLFSD
LDPFSSIASVAAPASPPPPGETESILTPIQSMLAPSLLVPEPVVQVMAPTEEKPVEEAAP
GAAVDLDLDMNDEGLDDLDLDNFDLDDDIDTSDVNLDDDFMDD
NT seq 4092 nt   +upstreamnt  +downstreamnt
atgcccctgcgtctggacatcaagcggaagctgacctctcggtcagaccgtgtgaagagt
gttgacctgcacccaacagaaccatggatggtggccagcctctacaatggcagtgtgtgt
gtgtggaaccacgagacccagaccctggtgaagaccttcgaggtgtgtgacctgcccgtg
agagtggccaagttcgtggctcgcaaacactgggtcattgctggagctgatgacatgcag
atcagagtgttcaactacaacacgctggagagaagccacatgttcgaggcccactcggac
tacatccgttgtatagcagtccaccctacacagccttacatcctcaccagcagtgacgac
atgctgatcaagctgtgggattgggacaggaagtgggtgtgtggtcaggtgttcgaaggc
cacacccactacgtcatgcagatcgtcatcaaccccaaagacaacaaccagtttgccagc
gcctctctggacaggaccattaaggtgtggcagctggggtccaacacacctaacttcacc
ctggagggtcatgagaagggggtgaactgcatcgactactacagcggaggagacaagccc
tacctgatatctggggcggatgaccgccttgttaagatctgggactaccagaacaagaca
tgtgtgcagactctggaaggccatgctcagaatgtgtcctgtgttagtttccaccctgaa
ctgccaatcatcctcacaggctccgaggacggcaccgtgcgagtctggcactccagcaca
taccgcctagagaacacgcttaactacggcatggagcgtgtgtggtgtgtgtgtggccag
cgcggctccaacagcgtggctctgggttacgacgaaggaagcatcctcatcaagttgggc
cgtgaggagccggccatgtccatggacgccagtgggaagatcatgtgggcgcgccactcg
gaggtgcagcaggccaacctgaaggccctgggagaggctgagatccgggacggagagcgc
ctccccctggccgtcaaggacatgggcagctgtgagatctacccccagaccatccagcac
aaccccaacggcaggttcgtggtggtgtgtggagacggagagtacatcatctacaccgcc
gtggccctcaggaacaagagcttcggctcagcccaggagtttgtctgggcccacgactct
tctgagtatgccattagagaaagcaacagtatgattaaaatcttcaagaactttaaggaa
aagaaagggtttaaaccagactttggtgctgaaggtatccacggtggtttcctgttgggt
gtgaggtccaccagtggtctggcgttctatgactgggaaaacgcagagctggtccggcgc
attgagatccagcccaaacatatcttttggtcagactcgggcgagctggtgtgcatcgcg
acggaggagtccttcttcgtgctgcgctacctgtctgagaaggtggccgtcgcccaggag
acgaaggagggggtgacggaggacgggatcgaggatgccttcgaggtgcttggggagatc
caggaggtggtgaagacggggatctgggtgggagactgcttcatctacaccagctccgtc
aacagactcaactactacgtggggggggagatcgtcaccatagcccacctggacagaacc
acgtacctgctgggctacatccccaaggacgaccgcctgtacctgggagacaaggagctc
aacatcgtcagcttctccctgctggtgtcggtgctggagtaccagacggccgtcatgcgg
agagacttcagcatggccgacagggtgctgcccaccatccccaaggagcagcgcacccgg
gtcgcccacttcctggaaaagcagggtttcaggcagcaggccctgggcgtgtccacagac
cccgagcacaggttcgagctggctctgcaactgggggagctgaagatagcctaccagctg
gccgtagaggcagagtccgagcagaagtggaagcagctagctgagctcgccaccaccaag
tgccagtttggcttggcccaggagtgcctgcaccatgcccaggactacggaggtcttctc
ctgctggccacagcctccgggaacgccagcatggtgggcaaactggcggagggagcggag
cgcgatggcaagaccaacgtggcgttcctcacctatttcctgcaggggaagttggagaaa
tgtctggacattctcatcaaaaccaaccgtctgcccgaggctgcgttcctggctaggacc
cacctgcccagtcacgtgtccagagtggtgaagctgtggaaggacagcctgtcgaaggtg
aaccagaaggcagccgacgcgctggcagaccccaccgagtacgggaacctgttccctggc
ctccagcaggccctgctggccgagacctacctgagggagacccacgtctgtctgcggcct
gccgccgagtacccccggatcacgcccagcgaggatcggagtgtccttgaggaatcttct
ggctacgtgccaacaggagggccgtctgcagagaaggtgcctgagttcatggaagaaccc
cccgtagtggcagaagtggtagcagctgcagctccagaagcccctgttctggaagaggcc
attacgatggaagaggaggaacctgtcgtggctgcagtggacaagtccgttgccatggag
gacgtgaagtccatcacagcagctgtggaagagtctattgccatgtccgctgaagaaaca
cctgtcacagaagtggaacagcccatcatggcagaagaggaggcccccatttctgttgaa
gtggttgcgtccgagccagaagtgacagcagatgtggaagataccattgcaaagcaagag
gaggttccagtcactgcagagggagacttactgggagatatcattacagacacaccccca
actataccagatatggtacaaagcctagaacaggacgtcatggtaacagaggaggctgct
gaggatggagcttcaacggctgaagtcatagcaacagatccagcacctgtagctgatgct
ttctcggcaacagaggaagatcacgataaagagacagtaactcctgtttatgaggcaaca
ttacaggtcatggcaacagaggaagcaccggtgacagattcagtcataccagaagccata
gcaaccgaaaaagcaccagaggctgttgtgatagagacggtggtagcaacagaagccaat
ccggttgctgaacttctatcagagtccatagcaacagaagaagtgtctgtaacagaggag
gtcataacagaagccatagcaacagaagcaacacctgttaccgaggtggcaccagaaccc
ctagcaaatgagccaacacctgagatggttaccatagatacaatggcagtgtccgaaaaa
gttgttacacaggtacttccagaaccaatcgtaccggcttatccagtagaggacctcatt
acagtggaagaaccaatgtcagtcccggcaccacttctagaccctttcccatctatggcc
ccagtactggagcccttctcatccctagcccctgccccaaacccagctacagccccagca
cttgacttattctcagacctagcccctgccccaaacccagctacagccccagcacttgac
ttattctcagacctagcccctgccccaaacccagctacagccccagcacttgacttattc
tcagacctagcccctgccccaaacccagctacagccccagcacttgacttattctcagac
ctagacccgttctcatctatagcttcagtggcagccccagcctcaccaccacccccaggg
gagacagagtccatcctcacccccatccagtccatgcttgccccctctctgcttgtcccg
gagcccgtggtccaagtaatggcccccacagaggagaagcctgtggaggaggcagcccct
ggggcagcagtagacctggacctggacatgaatgacgagggtctggacgatctagacctg
gacaactttgacctggatgatgacattgacacctcagacgtcaacctggacgatgacttc
atggatgactga

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