Osmerus eperlanus (European smelt): 134028749
Help
Entry
134028749 CDS
T10927
Name
(RefSeq) coatomer subunit beta'-like
KO
K17302
coatomer subunit beta'
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134028749
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oep04147
]
134028749
Membrane trafficking [BR:
oep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
134028749
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
134028749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
134028749
NCBI-ProteinID:
XP_062328509
LinkDB
All DBs
Position
11:4744876..4755493
Genome browser
AA seq
1363 aa
AA seq
DB search
MPLRLDIKRKLTSRSDRVKSVDLHPTEPWMVASLYNGSVCVWNHETQTLVKTFEVCDLPV
RVAKFVARKHWVIAGADDMQIRVFNYNTLERSHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDRKWVCGQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSNTPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIILTGSEDGTVRVWHSSTYRLENTLNYGMERVWCVCGQRGSNSVALGYDEGSILIKLG
REEPAMSMDASGKIMWARHSEVQQANLKALGEAEIRDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAVALRNKSFGSAQEFVWAHDSSEYAIRESNSMIKIFKNFKE
KKGFKPDFGAEGIHGGFLLGVRSTSGLAFYDWENAELVRRIEIQPKHIFWSDSGELVCIA
TEESFFVLRYLSEKVAVAQETKEGVTEDGIEDAFEVLGEIQEVVKTGIWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTTYLLGYIPKDDRLYLGDKELNIVSFSLLVSVLEYQTAVMR
RDFSMADRVLPTIPKEQRTRVAHFLEKQGFRQQALGVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELATTKCQFGLAQECLHHAQDYGGLLLLATASGNASMVGKLAEGAE
RDGKTNVAFLTYFLQGKLEKCLDILIKTNRLPEAAFLARTHLPSHVSRVVKLWKDSLSKV
NQKAADALADPTEYGNLFPGLQQALLAETYLRETHVCLRPAAEYPRITPSEDRSVLEESS
GYVPTGGPSAEKVPEFMEEPPVVAEVVAAAAPEAPVLEEAITMEEEEPVVAAVDKSVAME
DVKSITAAVEESIAMSAEETPVTEVEQPIMAEEEAPISVEVVASEPEVTADVEDTIAKQE
EVPVTAEGDLLGDIITDTPPTIPDMVQSLEQDVMVTEEAAEDGASTAEVIATDPAPVADA
FSATEEDHDKETVTPVYEATLQVMATEEAPVTDSVIPEAIATEKAPEAVVIETVVATEAN
PVAELLSESIATEEVSVTEEVITEAIATEATPVTEVAPEPLANEPTPEMVTIDTMAVSEK
VVTQVLPEPIVPAYPVEDLITVEEPMSVPAPLLDPFPSMAPVLEPFSSLAPAPNPATAPA
LDLFSDLAPAPNPATAPALDLFSDLAPAPNPATAPALDLFSDLAPAPNPATAPALDLFSD
LDPFSSIASVAAPASPPPPGETESILTPIQSMLAPSLLVPEPVVQVMAPTEEKPVEEAAP
GAAVDLDLDMNDEGLDDLDLDNFDLDDDIDTSDVNLDDDFMDD
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcgtctggacatcaagcggaagctgacctctcggtcagaccgtgtgaagagt
gttgacctgcacccaacagaaccatggatggtggccagcctctacaatggcagtgtgtgt
gtgtggaaccacgagacccagaccctggtgaagaccttcgaggtgtgtgacctgcccgtg
agagtggccaagttcgtggctcgcaaacactgggtcattgctggagctgatgacatgcag
atcagagtgttcaactacaacacgctggagagaagccacatgttcgaggcccactcggac
tacatccgttgtatagcagtccaccctacacagccttacatcctcaccagcagtgacgac
atgctgatcaagctgtgggattgggacaggaagtgggtgtgtggtcaggtgttcgaaggc
cacacccactacgtcatgcagatcgtcatcaaccccaaagacaacaaccagtttgccagc
gcctctctggacaggaccattaaggtgtggcagctggggtccaacacacctaacttcacc
ctggagggtcatgagaagggggtgaactgcatcgactactacagcggaggagacaagccc
tacctgatatctggggcggatgaccgccttgttaagatctgggactaccagaacaagaca
tgtgtgcagactctggaaggccatgctcagaatgtgtcctgtgttagtttccaccctgaa
ctgccaatcatcctcacaggctccgaggacggcaccgtgcgagtctggcactccagcaca
taccgcctagagaacacgcttaactacggcatggagcgtgtgtggtgtgtgtgtggccag
cgcggctccaacagcgtggctctgggttacgacgaaggaagcatcctcatcaagttgggc
cgtgaggagccggccatgtccatggacgccagtgggaagatcatgtgggcgcgccactcg
gaggtgcagcaggccaacctgaaggccctgggagaggctgagatccgggacggagagcgc
ctccccctggccgtcaaggacatgggcagctgtgagatctacccccagaccatccagcac
aaccccaacggcaggttcgtggtggtgtgtggagacggagagtacatcatctacaccgcc
gtggccctcaggaacaagagcttcggctcagcccaggagtttgtctgggcccacgactct
tctgagtatgccattagagaaagcaacagtatgattaaaatcttcaagaactttaaggaa
aagaaagggtttaaaccagactttggtgctgaaggtatccacggtggtttcctgttgggt
gtgaggtccaccagtggtctggcgttctatgactgggaaaacgcagagctggtccggcgc
attgagatccagcccaaacatatcttttggtcagactcgggcgagctggtgtgcatcgcg
acggaggagtccttcttcgtgctgcgctacctgtctgagaaggtggccgtcgcccaggag
acgaaggagggggtgacggaggacgggatcgaggatgccttcgaggtgcttggggagatc
caggaggtggtgaagacggggatctgggtgggagactgcttcatctacaccagctccgtc
aacagactcaactactacgtggggggggagatcgtcaccatagcccacctggacagaacc
acgtacctgctgggctacatccccaaggacgaccgcctgtacctgggagacaaggagctc
aacatcgtcagcttctccctgctggtgtcggtgctggagtaccagacggccgtcatgcgg
agagacttcagcatggccgacagggtgctgcccaccatccccaaggagcagcgcacccgg
gtcgcccacttcctggaaaagcagggtttcaggcagcaggccctgggcgtgtccacagac
cccgagcacaggttcgagctggctctgcaactgggggagctgaagatagcctaccagctg
gccgtagaggcagagtccgagcagaagtggaagcagctagctgagctcgccaccaccaag
tgccagtttggcttggcccaggagtgcctgcaccatgcccaggactacggaggtcttctc
ctgctggccacagcctccgggaacgccagcatggtgggcaaactggcggagggagcggag
cgcgatggcaagaccaacgtggcgttcctcacctatttcctgcaggggaagttggagaaa
tgtctggacattctcatcaaaaccaaccgtctgcccgaggctgcgttcctggctaggacc
cacctgcccagtcacgtgtccagagtggtgaagctgtggaaggacagcctgtcgaaggtg
aaccagaaggcagccgacgcgctggcagaccccaccgagtacgggaacctgttccctggc
ctccagcaggccctgctggccgagacctacctgagggagacccacgtctgtctgcggcct
gccgccgagtacccccggatcacgcccagcgaggatcggagtgtccttgaggaatcttct
ggctacgtgccaacaggagggccgtctgcagagaaggtgcctgagttcatggaagaaccc
cccgtagtggcagaagtggtagcagctgcagctccagaagcccctgttctggaagaggcc
attacgatggaagaggaggaacctgtcgtggctgcagtggacaagtccgttgccatggag
gacgtgaagtccatcacagcagctgtggaagagtctattgccatgtccgctgaagaaaca
cctgtcacagaagtggaacagcccatcatggcagaagaggaggcccccatttctgttgaa
gtggttgcgtccgagccagaagtgacagcagatgtggaagataccattgcaaagcaagag
gaggttccagtcactgcagagggagacttactgggagatatcattacagacacaccccca
actataccagatatggtacaaagcctagaacaggacgtcatggtaacagaggaggctgct
gaggatggagcttcaacggctgaagtcatagcaacagatccagcacctgtagctgatgct
ttctcggcaacagaggaagatcacgataaagagacagtaactcctgtttatgaggcaaca
ttacaggtcatggcaacagaggaagcaccggtgacagattcagtcataccagaagccata
gcaaccgaaaaagcaccagaggctgttgtgatagagacggtggtagcaacagaagccaat
ccggttgctgaacttctatcagagtccatagcaacagaagaagtgtctgtaacagaggag
gtcataacagaagccatagcaacagaagcaacacctgttaccgaggtggcaccagaaccc
ctagcaaatgagccaacacctgagatggttaccatagatacaatggcagtgtccgaaaaa
gttgttacacaggtacttccagaaccaatcgtaccggcttatccagtagaggacctcatt
acagtggaagaaccaatgtcagtcccggcaccacttctagaccctttcccatctatggcc
ccagtactggagcccttctcatccctagcccctgccccaaacccagctacagccccagca
cttgacttattctcagacctagcccctgccccaaacccagctacagccccagcacttgac
ttattctcagacctagcccctgccccaaacccagctacagccccagcacttgacttattc
tcagacctagcccctgccccaaacccagctacagccccagcacttgacttattctcagac
ctagacccgttctcatctatagcttcagtggcagccccagcctcaccaccacccccaggg
gagacagagtccatcctcacccccatccagtccatgcttgccccctctctgcttgtcccg
gagcccgtggtccaagtaatggcccccacagaggagaagcctgtggaggaggcagcccct
ggggcagcagtagacctggacctggacatgaatgacgagggtctggacgatctagacctg
gacaactttgacctggatgatgacattgacacctcagacgtcaacctggacgatgacttc
atggatgactga
DBGET
integrated database retrieval system