Osmerus eperlanus (European smelt): 134028766
Help
Entry
134028766 CDS
T10927
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134028766
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134028766
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134028766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
DUF7420
Motif
Other DBs
NCBI-GeneID:
134028766
NCBI-ProteinID:
XP_062328540
LinkDB
All DBs
Position
11:8737197..8742145
Genome browser
AA seq
751 aa
AA seq
DB search
MHLNPTQDCLGKKRDITNDTEDIEDTEDDDVDNNGSKLLDVVGGDASHPPMDSPIPVPSR
DKHNTLNMERLFGAASKGDVCLLNGFLEYFQLTGKHLTDREFKDPTNGKTALLKALLNLK
DGKNDTIETLLEIAEITGGSQVLKNFVNAPYTDIYYKGQTALHVAIERRSFHLVKLLVEK
GADVQVKASGKFFQQYAKPGFYFGELPLSLAACTNQLDIVSYLMENPXVLHALVAIADNT
PENTDFVTRIYDEILIRDAKLGKERDSKTNDKIKLEDIENNHGMTPLKLAAKTGKIGIFR
HMVQREFTEEETRDLSRKFTEWAYGPIHSSLYDLESLDTYESNSVLEIIVYGSGIPNRHD
MLETEPLHRLLEEKWDIFASKMFFVNFIVYMVYLGIFTAVAFYRKEGQPPFPVEDTPLDC
LRTVGEFISVIGAIYFLCKGIINLKRKPPNCQALYLDGFCDILFLLQAVLLLVCVVLYVC
GQTEYVGPLVLSLAFSWINLLYFTRGSRHMGIYSVMMQRMIMGDIVRFLFVYIVFLLGFS
IAIVVLIEENPPLRSLSRKVGLRTEICMRPTYNNIGFTTLELFKFTIGMGDLEFTDQVQY
KEVFYILLISYIILTYILLLNMLIALMSETVEKISRDSESIWKLQRAHTILDLERSLPKC
LRKKLRSGVVKKLGDVHRRFFRVEEVNWKKWRTNLGIINEEDPGSCEITKLHSHENTEQQ
GNQLRLSPLLKRFSFRQNQGQNRQGYITANV
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcacctaaaccccactcaagactgtcttggcaaaaagagagatattacaaatgacaca
gaagacatagaggatacagaggatgatgatgtggataacaatggcagtaagctgcttgat
gttgtggggggtgatgcaagtcatcccccaatggattctcccattcctgttccgagcaga
gacaaacacaacacattaaatatggaacgtttgtttggggcagcatcaaaaggagatgtc
tgtcttttaaatggattcctggagtactttcaacttacagggaaacatcttacagacaga
gagtttaaagatccaacaaatgggaaaacagctcttctgaaggccctcttgaatctgaaa
gatggcaagaatgacactatagaaactcttctggagattgcagagataactgggggttca
caagttttaaaaaactttgtaaatgctccctacacagacatttattacaaaggtcagaca
gctcttcatgttgctattgagagacgaagctttcacttagtgaaacttctggttgagaaa
ggcgccgatgtccaggtcaaagcctctggcaagttcttccagcaatatgcaaagcctggt
ttttattttggtgagcttcctctgtctttggcagcctgcaccaatcagctggacattgtg
tcctatctcatggagaacccancagtcttgcatgcactggtcgccatagcagacaacacc
ccggaaaatactgactttgtcacaagaatatatgatgagattcttatacgggatgctaaa
ctgggaaaggaaagggacagcaaaacaaatgacaaaatcaaactagaggatattgaaaac
aaccatgggatgactcctttaaagttagccgccaagacaggaaagattgggattttcaga
cacatggtgcagcgtgagttcacagaggaagagaccagagacctttccaggaagtttacc
gagtgggcctacggacccatccactcatccctgtatgacttggagtccctcgacacctat
gagtcaaactcggtgttggagattattgtctacggcagtgggattccgaatcgccacgat
atgctggaaacagagcctctacacagacttcttgaggagaaatgggatatatttgccagt
aagatgtttttcgtcaattttatagtttacatggtatacctgggtatcttcacagctgtg
gccttttacagaaaggaaggacagccaccatttcctgtagaagacacaccacttgactgc
cttcgtactgttggcgagtttattagtgtaataggtgcaatatacttcctctgtaaaggg
ataattaatctaaaaagaaaacccccaaactgccaggctttgtatcttgacggattttgc
gatattctatttctcctgcaggctgtgctccttctggtctgtgtggttttatatgtctgt
ggtcagacggaatatgtcggacctctggtgctttcacttgccttctcctggatcaatctc
ctttacttcaccagagggtctagacacatgggaatctacagtgtcatgatgcaaaggatg
atcatgggggacattgtacgatttctctttgtctatatcgtctttcttttaggtttttct
atagctattgtggtgctaattgaggagaatccacctctcagatctctgtcaaggaaagtg
ggacttcgaactgaaatctgcatgaggccaacctataacaacataggctttaccaccctg
gagctgtttaagtttaccatcggtatgggtgacctggagtttactgaccaggtccagtat
aaggaggtgttctacattcttctaatctcctacattatcctcacctacatactgctgctc
aacatgctcatagccctcatgagtgagactgtcgagaagatctccagagacagcgaaagc
atctggaaattacagagggcacataccatcttagacttagagagaagccttcccaagtgc
ctcaggaaaaaactgaggtcgggagtggtgaagaagcttggagacgtccatcgcaggttt
ttccgggtagaagaagtcaattggaagaaatggcggacaaacctgggaatcataaatgag
gaagatcctgggagttgtgaaattaccaaattacactcccatgaaaacactgagcagcaa
gggaatcaactgcgactaagtcctttactgaagaggttcagcttcaggcagaatcaagga
caaaatagacaaggctacattactgccaatgtttga
DBGET
integrated database retrieval system
